Mus pahari (shrew mouse): 110318357
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Entry
110318357 CDS
T05929
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110318357 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110318357 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mpah03310
]
110318357 (Rorb)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110318357 (Rorb)
Nuclear receptors [BR:
mpah03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110318357 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110318357
NCBI-ProteinID:
XP_021049008
Ensembl:
MGP_PahariEiJ_G0014302
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All DBs
Position
1:complement(130903282..131076623)
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AA seq
470 aa
AA seq
DB search
MCENQLKTKADCTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLSNLNTETGGTYANGHVIDLPKSEGYYSIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaactaaagctgactgcactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctccgggatccactacggagtcatcacgtgtgaaggc
tgcaagggattcttcaggaggagccagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacaggaaccgttgccaacactgccgcctgcagaag
tgtcttgccctaggaatgtcaagagatgctgtaaagttcgggaggatgtccaagaagcag
cgagacagcctgtatgctgaggtgcagaagcatcagcaaaggctgcaggagcagcggcag
cagcagagtggggaggcggaggccctcgccagggtgtacagcagcagcattagcaatggc
ctcagcaacctgaacaccgagaccggcggcacatacgctaatgggcacgtcattgacctg
cccaagtccgaaggttattacagcatagattccggtcaaccgtctcccgatcagtcagga
ctggacatgactggaatcaaacagataaagcaagaacctatctatgacctcacatccgtt
cccaacttgtttacctatagctctttcaacaacgggcagttagctcccgggataacaatg
tctgaaatcgatcgaattgcacagaacatcattaagtcccatttggagacatgtcagtac
acaatggaagagctccatcagctggcatggcagacccacacctacgaggaaatcaaggcg
tatcaaagcaagtccagggaggctctgtggcagcagtgtgctatccagatcacccatgcc
atccagtacgtggtagagttcgccaagcggataacaggcttcatggagctgtgtcagaac
gatcagatcttacttctgaagtcaggttgcttggaagtggttttagtgagaatgtgtcgt
gccttcaacccattaaacaacacagttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttcggatgacctagtgaatgaagcgtttgactttgcgaagaatctg
tgttccttgcagctgactgaggaggagatcgctctcttctcctctgctgttctgatatcc
ccagaccgagcctggctgatcgaaccaagaaaagtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcacctggatgatgagaccctggcaaagtta
atagccaagataccaacgatcacggcagtctgcaacttgcatggggagaagctgcaggta
tttaagcagtctcatccagacattgtgaatacactgtttcctccattgtacaaggagctc
tttaatcctgactgtgctgcggtctgcaaatga
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integrated database retrieval system
