Mus pahari (shrew mouse): 110318451
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Entry
110318451 CDS
T05929
Symbol
Lmx1b
Name
(RefSeq) LIM homeobox transcription factor 1-beta isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110318451 (Lmx1b)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110318451 (Lmx1b)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dppa2_A
HTH_32
Motif
Other DBs
NCBI-GeneID:
110318451
NCBI-ProteinID:
XP_021049166
Ensembl:
MGP_PahariEiJ_G0024919
LinkDB
All DBs
Position
3:complement(20867220..20944949)
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AA seq
402 aa
AA seq
DB search
MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQ
RPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCME
KIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVS
PDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEV
SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSS
RMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGDHMNPYGNDSIFHDID
SDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcaacaggtcccgagtcgctggagaggtgcttccctcgcgggcagacggac
tgcgccaagatgttggacggcatcaagatggaggagcacgcccttcgccccgggcccgcc
accctgggggtgctgctgggctccgactgcccgcatcccgccgtctgcgagggctgccag
cggcccatctccgaccgcttcctgatgcgagtcaacgagtcgtcctggcacgaggagtgt
ttgcagtgcgcggcatgtcagcaagccctcaccaccagctgctacttccgggatcggaaa
ctgtactgcaaacaagactaccaacagctcttcgcagcaaagtgcagcggctgcatggag
aagatcgcccctaccgagttcgtcatgcgagcgctcgagtgtgtctaccacctgggctgt
ttctgctgctgtgtgtgcgagaggcagctgcgcaagggggatgagttcgtgctcaaggag
ggccagctgctgtgcaagggcgactacgagaaggagaaagacctactcagctccgtgagc
ccggacgagtctgactctgtgaagagtgaggacgaagatggagacatgaagccggccaag
gggcagggcagccagagtaagggcagtggagatgacgggaaggacccgaggaggcccaaa
cggccccggaccatcctcaccacgcagcagcgaagagctttcaaggcttcctttgaggtg
tcctccaagccctgtcggaaggtccgagagaccctggcagcagagacgggcctcagcgtg
cgtgtggtccaggtctggtttcagaaccaaagagcaaagatgaagaagctggcccggaga
caccagcaacagcaggagcagcagaactcccagcggctgggccaagaggttctgtcaagc
cgcatggagggcatgatggcctcctacacgccgctggcccctccgcagcagcagatcgtg
gccatggagcagagcccctacggaagcagcgaccccttccagcagggcctcacgccgccc
caaatgccaggtgaccacatgaacccctatgggaacgactccattttccacgatatcgat
agtgatacctccctcaccagcctcagcgactgcttcctcggctcttccgacgtgggctcc
ctgcaggcccgagtggggaaccccattgaccggctctactccatgcagagctcctacttt
gcctcctga
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