Mus pahari (shrew mouse): 110318559
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Entry
110318559 CDS
T05929
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110318559 (Ctr9)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110318559 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
110318559
NCBI-ProteinID:
XP_021049370
Ensembl:
MGP_PahariEiJ_G0013541
LinkDB
All DBs
Position
1:80860925..80890646
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEEEEGGERKKKRR
RRPPKGEEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESDSDDNQNKSGSEAGSPRRSGRQESD
EDSDSDQPSRKRRRSGSEQSDNESVQSGRSPSGGSENENDSRPVSPSAESDHESEQGSDN
EGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagacgaagttatcagcatcctgaagcaggagcacacacag
ctgcacatatggattgccttggcgctggaatactacaagcaagggaaaacagaagagttt
gtgaagctgctggaggcagcacggatagatggcaatttggactaccgagatcacgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtacaacaggctcggaaggaa
aagaacaaagacaataagaaggatcttatcacgcaggcaactttgttatatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctgctt
gagggtgacaaaatggaccaagctgacgcacagtttcattttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcttgtatttcattcaacaagaaggattacaga
ggcgctctggcttactataaaaaagcattgcgcactaacccaggatgtccagctgaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaactggaaaaagctcgactagca
ttcagtagagccctggaactcaactcgaagtgtgtgggagcactggttggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtgcagcttctttccaga
gcttatactattgatcctagcaaccctatggtactgaaccatttggcaaaccactttttc
ttcaagaaggattatagtaaagtgcagcacctggctctccacgcattccacaacacagag
gtggaggctatgcaagcagaaagctgttaccagctggctcggtcattccatgttcaggaa
gattatgaccaagcctttcagtactactatcaagccacacagtttgcttcatcttccttt
gtcctaccgttttttggtttggggcaaatgtatatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcgtatccgaacaactacgaaactatgaaaatc
ctcggctctctctatgctgcctcagacgatcaggagaaacgagacatagccaagggccat
ttgaagaaggtcacagaacagtatcctgatgacgtggaagcttggattgagttggcccag
atcttagaacagactgacatacagggtgccctttcagcctatgggacagccacacgcatc
ctgcaggagaaggtgcaggctgatgtccctccggagatcttgaataatgttggagccctc
catttcagacttggaaacctgggtgaagcaaagaaatacttcctggcctcactggaccgc
gcaaaggcagaggcagagcatgatgaacactattacaatgccatctctgttaccacatcc
tacaatttagccaggctctatgaggccatgtgtgaatttcacgaagcagagaaactgtac
aaaaacattttacgagagcatcctaactacgttgattgctatctgcgcctaggagccatg
gccagagataaaggaaacttctatgaagcttcagattggtttaaggaagcccttcagatc
aatcaggatcatccggatgcctggtctctgattggtaacctccatctggcaaaacaagaa
tggggtccagggcagaagaagtttgagaggatattaaaacagccagccacacagagtgac
acctactctatgctggcccttggcaatgtgtggctccagactttgcatcagccaacccga
gaccgagaaaaggaaaagcgccatcaagaccgtgccctggccatctacaaacaagttctc
agaaatgacgccaagaacctgtatgctgccaatggcataggagctgtcttggcccacaaa
ggatacttccgtgaagctcgtgatgtatttgcccaagtgagagaagcaacagcagatatc
agtgatgtgtggctgaacctagcacacatctacgtggagcagaagcagtatatcagcgcc
gttcagatgtatgagaactgcctcagaaagttctataagcaccaaaacactgaagttgtg
ctctacctggcccgtgccctcttcaagtgtggcaagttgcaggagtgcaagcagactctg
ctgaaggccagacacgtggcacccagtgacacagttctgatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatctgaaggaagtcctt
aatgctgtgaaagagctggagcttgctcacaggtacttcagttacttgagtaaagttgga
gataaaatgagatttgatttggcccttgctgcctctgaagccaggcagtgctccgactta
ctgagccaggcccagtaccatgtggcccgggcacgcaagcaggatgaggaagaacgggaa
ctgcgggccaagcaggagcaggagaaggagctcttaagacagaagcttctcaaagaacag
gaagagaaacgtctcagagaaaaggaagaacaaaagaaacttttggaacagcgagcccag
tatgtggagaagaccaaaaatatccttatgttcactggcgagactgaagcaacaaaggag
aagaaaagaggtggaggtggagggcggcgttccaagaaaggaggcgagtttgatgagttt
gtcaacgatgacactgatgatgacctccctatatccaaaaagaagaagagaaggaagggc
agtggcagtgaacaggaaggtgaagaggaggaaggtggagagaggaagaagaagaggagg
agaagacctccaaagggagaagaaggatctgatgatgacgagacagaaaatggccccaaa
ccgaagaagcgccgtccaccaagagcagagaaaaagaaggctcccaagccagaacgcctg
cctccttcaatgaagggaaaaataaaatccaaagccattatatcatcaagtgatgattct
tcagatgaggataaactgaaaattgctgatgaaggacatcccaggaatagcaacagcgat
tctgatgatgacgagaggcccaacagacgcgcctcatctgagagcgactcagatgacaac
cagaacaagtctggcagcgaggcgggcagccctcggaggtcgggtagacaggagtcggat
gaggattctgacagtgaccagccatccagaaagagaaggcgctctggctctgagcagtcg
gacaatgagtctgtgcagtctgggagaagcccctccggaggttctgaaaacgagaacgat
tctcgcccggtttctccaagtgcagaatcggaccacgaatcagagcagggctctgacaat
gagggttctggccaaggctctggaaatgaatcagaaccagagggctcaaacaacgaggcc
tcagaccgaggctcagaacatgggtcagatgatagtgactag
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integrated database retrieval system
