Mus pahari (shrew mouse): 110318851
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Entry
110318851 CDS
T05929
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04140
Autophagy - animal
mpah04148
Efferocytosis
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110318851 (Vps16)
04148 Efferocytosis
110318851 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110318851 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110318851 (Vps16)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110318851 (Vps16)
Hops complex
110318851 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
110318851
NCBI-ProteinID:
XP_021049810
Ensembl:
MGP_PahariEiJ_G0025748
LinkDB
All DBs
Position
3:113547560..113567960
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AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELKDCLVAAAPYGGPIALLRNCWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGPVVALGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCHDRAPHILLAVGPDLYLLDHATCSAVTPAGLAPGVSGFLQMAVSFTYRYLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLIQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH
MCQDLRVLNAIRDYHIGIPLTYTQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEAKKYASRVG
PEQKVKALLLVGDVAQAAEVAIEHRNETELSLVLSHCTGATDGAIADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacactgcgaactggaatccactcggggactctgccttttaccggaagtat
gaactgtacagcatggactgggacctgaaggaggaactcaaggattgcctggtggctgct
gcaccctatgggggtcccattgctctactgaggaactgttggagaaaagagaaagctgcc
agcgtgcggccagtactggagatctactctgcatctggcttgccactggctagcctgctg
tggaagagtgggcctgtggtggccctcggctggtcagctgaggaggagctgctctgtgtg
caagaagatggtgcagtgctagtttatggtcttcatggagacttccggaggcacttcagc
atgggcaatgaagtgcttcagaaccgtgtcctggatgcccggatttttcacactgagttt
ggttcaggggtggccatccttacaggagcctatcgctttactctgagtgccaatgtgggt
gacctcaaactccgtcggatgccagaggtgccaggtctgcagagtgcaccctcatgttgg
accacactgtgccatgaccgagccccacacatccttctggctgtaggccccgatctttac
cttctggatcatgctacctgctctgcagtgacacctgctggcctagccccaggagtgagc
ggcttcctacagatggctgtatccttcacgtatcgttacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggctcccccgaagcagatggtctggtgtagccgtcctcgaagcaaggaaagggct
gttgttgtggcctgggagaggcggctgatggtggtgggcaatgcgcctgaaagcattcag
tttgtgctcgatgaggactcttacttagtgcctgagcttgatggggtccgcatcttctcc
cgaagcacccatgagttcctgcatgaagtcccagtggccagtgaagagatcttcaaaatc
gcctcaatggcccctggagcgctgctgttggaggcccagaaggaatatgagaaagagagc
cagaaagcagatgagtacctgcgggagatccaggagctgggacagctgatccaggctgtg
cagcagtgcatcgaggctgcaggacatgagcaccagccagacatgcaaaagagtctgctc
agggcggcttcatttggaaagtgtttccttgacagatttccacccgacagcttcgtgcac
atgtgtcaggaccttcgagtgctcaatgctattagagactaccacattgggatccctctc
acctatacccaatacaagcagctcaccatccaggtgctgctagacaggcttgtgttgcgg
aggctttatcccctggctatccagatatgcgagtacctgcgccttcctgaagtccagggt
gtcagcaggatcctagcccactgggcctgctacaaggtgcagcagaaagatgtctcagat
gaagatgtagcacgggctattaatcagaagctgggtgacacgcctggtgtttcatactct
gacattgctgcacgggcctatggctgtggccgcactgaactggccattaagctgctggaa
tatgagccacggtcaggggagcaggttcctcttctcctaaagatgaagaggagcaaactc
gccctgagcaaggccattgagagtggagacacagacctggtgtttacagtgttgctgcac
ctaaagaatgaactcaatcgaggagactttttcatgactctccggaaccaacccatggcc
ctgagtttgtatcgacagttctgtaagcatcaagagctagacactctgaaggacctttac
aatcaggacgacaatcaccaggaattgggcagcttccacatcagagccagctatgctgct
gaagagcgtattgaagggcgagtagcagctctgcagacagcagctgatgccttctacaaa
gccaagaatgaatttgcagccaaggccacagaggatcaaatgaggctcctgcggctacag
cgacgactagaggatgagctagggggcaggttcttagacctatctctacatgacactgtc
accactcttatccttggaggccacaacaagcgggcagagcagctggcacgtgacttccga
atccctgataagaggctctggtggttaaagctggctgccctggcagatctggaagattgg
gaggagctggagaagttttccaagagcaagaaatcaccgattggctacctgccctttgta
gagatctgcatgaaacagcataacaaacatgaggccaagaagtatgcttcccgcgtgggc
cctgaacaaaaggtcaaggctttgcttcttgtcggggatgttgctcaggctgcagaggtg
gctattgagcaccggaatgaaacggagctgagcctcgttttgtcccactgcactggagct
acagatggggccatagctgacaagattcagcgggccagagcacaagcccagaagaagtga
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integrated database retrieval system
