Mus pahari (shrew mouse): 110318938
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Entry
110318938 CDS
T05929
Symbol
Hoxd1
Name
(RefSeq) homeobox protein Hox-D1
KO
K09301
homeobox protein HoxA/B/D1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110318938 (Hoxd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110318938 (Hoxd1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110318938 (Hoxd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Auxin_canalis
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110318938
NCBI-ProteinID:
XP_021049944
Ensembl:
MGP_PahariEiJ_G0025128
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All DBs
Position
3:60799609..60801774
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AA seq
328 aa
AA seq
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MSSYLEYVSCAAGGGSGGVGGDVLGFAPKFCRADARPVALQPAFPLGSGDGAFVSCLPLA
TARPTPSPPAAPAQSPVPQPAAPRYAPCTLEGAYERGAAPASASEYGFLGSGPAFDFPGA
LGRASDEGGAHVHYATSAVFSGGGSFLLSGQVDFAAFGEPGPFPACLKEPADGHPGPFQT
VSPAPGACPKSASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPPSAIRTNFSTKQ
LTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVA
SIQLSRSETSPTKSGRNLGSPSQIQEPS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctacctggagtacgtgtcgtgtgctgcgggcggtggcagcggaggggtaggc
ggcgacgtgctcggcttcgcacccaagttctgccgtgccgacgcgcgccccgtggccctg
caacccgcctttcccctaggtagcggagacggcgccttcgtgagctgcctgcccctggcc
accgctcggcccacgccatcgcctcccgcagcccccgctcagtccccggtcccgcagccc
gccgcgccccggtacgctccctgcacactggaaggcgcctacgagcggggcgccgcacct
gcctctgcctccgagtatggcttcttggggtccgggccggcgttcgacttcccgggcgca
cttgggagagcgtcggacgagggcggggcgcacgtccactatgccacctcggcggtcttc
tctggcggaggatcattcctgctcagcggccaggtggacttcgctgcctttggcgaacct
ggccccttccccgcgtgtctcaaggagcccgcagacggccaccctgggccctttcagact
gtgtccccggcccctggagcctgccccaagtccgcctctcccacctccagcctcccggcc
gcccacagtactttcgagtggatgaaagtgaagaggaacgcccccaagaaaagcaaactg
tccgaatatggagccacaagccctcccagtgccatccgcacgaattttagcaccaagcaa
ctgacagagctagagaaagagtttcatttcaataagtacctaactagagcccgacggatc
gagatagccaactgtttacagctgaatgacacccaggtcaaaatctggttccagaaccgt
aggatgaaacagaagaaaagggaacgagaggggcttctggccacagctgcctctgtggcc
tcaattcagctttcccggtcagaaacaagtcccaccaaatctggccggaatctaggaagc
ccttcgcagattcaagagccttcctga
DBGET
integrated database retrieval system
