Mus pahari (shrew mouse): 110318965
Help
Entry
110318965 CDS
T05929
Symbol
Ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
110318965 (Ttf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110318965 (Ttf1)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
110318965 (Ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110318965
NCBI-ProteinID:
XP_021049988
Ensembl:
MGP_PahariEiJ_G0024820
LinkDB
All DBs
Position
3:16348087..16377666
Genome browser
AA seq
824 aa
AA seq
DB search
MKGDTSKFKTHTATLYKKKKRSSASEKRPQKWPPQGLGSEQPQVPVLRKRESQTPAQGNL
ESERPQKAKRKKRRREFQTPAQENRESGQPPVSLLGKRRREFQTPAQENXESEQPRKAKR
RKKKKKESQQPTSSLLKNPETFRKAKKTTSAHKKKKNSVLEVDMETGIILVDKENVENLL
ETCRKDVDIVYVDMSKGQRSARVRATEALPTAKPQKHGCRELHGDVRSKKKPKHPQQVAQ
PESISLPPSESLSSEDLEGTSTEAAVFCKKKSKKNVFRNQKLEPVPDSLDSSETISESRD
TTHHGQVTGAGEEGESTKESHSIRKKSKKKKHRSVALATSSDSASALDSKAENARVDSPE
GSGAVRKEDVDHRPAEAEAQACSTGKHREEMQRLEPTHEEESNLESASNSATRPISEDRR
DSDDSDVDLGSAVRQLREFIPDIQERAATTIRRMYRDDLGRFKEFKAQGVAIRFGKFSAK
ENKQIEKNVQDFLSLTGIESADKLLYTDRYPEERSQITNLKRKHAFRLHIGKGIARPWKL
VYYRAKKIFDVNNYKGRYNEEDTKKLKAYHSLHGNNWKKIGAMVARSSLSVALKFSQIGG
NRNLGAWSKAETQRLIKAVEDVILKKMSPQELKELDSRLQEDPEGRLSIVREKLYKGISW
VEVEARVETRNWMQCKSKWTEILTKRMTHGGFVYRGVNALQAKITLIERLYELNVNDANE
IDWEDLAGAIGDVPPPFVQAKFYKLKAAXVPFWQKKTFPEIIDYLYENSLPLLKKKLDKK
MEKKVGQIQTPAAPKQDFLFKDIFHCDDDSDEGGPEEPSASDVQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggggacacaagcaaatttaagacccacactgcaactttgtacaagaaaaagaaa
cggtcttctgcgtctgaaaaaagacctcagaaatggccccctcaaggcttggggagcgag
cagcctcaggtacctgtgttgaggaagagggagtctcagacaccagcccaggggaactta
gagagtgagcggcctcaaaaggccaagaggaagaagaggaggagggagttccagacacca
gctcaggaaaacagggagagtgggcagcctccggtgtccttgctggggaagaggaggagg
gagttccagacaccagcccaggagaacngngagagtgagcagcctcggaaagccaagaga
aggaagaagaaaaagaaagagtcccagcagcctacttcctcccttctgaaaaatccagaa
accttccgtaaagctaaaaaaaccacttctgcccacaaaaagaaaaagaatagtgtttta
gaggtggatatggaaactgggatcatccttgtagataaagaaaacgtggagaacctgcta
gagacttgtagaaaggatgtggacattgtttatgttgatatgagcaagggacaaaggtca
gcaagagtgcgtgcaacagaagcgctgcccactgctaaaccacagaaacatggctgtcga
gagctgcacggcgatgtcaggagcaaaaagaaaccaaagcacccccagcaagttgcacag
cctgagagtatctccctgcccccatcagagtccttgtcttctgaagatttagaaggcaca
agcacagaagcagcagtgttttgtaaaaagaagtctaaaaaaaatgtgttcaggaaccag
aaactggagcctgtccctgacagccttgatagctcggagactatctctgagagtcgtgat
accacacaccatggacaagttactggggctggagaagaaggtgagagcaccaaggaatcc
cacagtatcaggaaaaagtccaagaaaaagaagcacagatctgttgctcttgccacatct
agtgacagtgcctcagcgctagacagcaaggctgagaatgcccgggtggactcaccagaa
ggcagcggtgctgtgaggaaagaggatgtggaccacaggccagcggaggcagaagcccag
gcttgttccactgggaagcacagggaagagatgcagaggttagaacctacccatgaagaa
gaaagcaatttggaatcagctagcaattctgcaacaagacccatatctgaggaccggaga
gattctgatgactcggatgttgatttgggctctgcagtgagacagctgcgagagttcatt
cctgacatacaggaaagggcggccaccaccatcagacgcatgtatcgggacgacctaggg
cgcttcaaagaattcaaggcacaaggtgtggctattagatttggcaaattttctgctaaa
gaaaataaacaaatagaaaaaaatgtgcaagatttcttgtccctgactggaattgagagt
gcagacaagctgctgtacacagacagatacccagaggaaaggtctcagatcaccaaccta
aaacggaagcatgccttcagactgcacattgggaagggcatcgctcggccctggaagctt
gtgtactaccgtgcaaagaagatatttgatgtgaataactacaaaggcaggtacaatgaa
gaagatactaagaagctgaaggcataccattccctccatggaaacaactggaaaaagatt
ggggccatggtggcccgaagcagcctctcagtcgccctcaagttctctcagattggtggt
aatagaaaccttggtgcttggagtaaggcagaaacccagaggctaatcaaggctgtggag
gatgtgatcctaaagaagatgtctccccaggagttaaaagaactggattctagactccag
gaagaccctgagggtcgcttgtcaattgtccgggaaaaactctacaagggcatttcatgg
gtggaggtggaagctagagtggagacccggaactggatgcagtgcaaaagtaagtggaca
gagattcttaccaaaaggatgacccatggtgggttcgtgtatcgtggggtcaatgctcta
caggccaaaatcacccttattgaaaggttgtatgaactaaatgtgaatgatgctaatgaa
atagactgggaagatcttgctggcgccataggggatgtccctccaccttttgttcaggca
aaattttataagctgaaagctgcctncgttcccttttggcagaaaaaaacttttccggaa
atcattgactacttatatgagaacagtctgcctttgctgaagaaaaagttagacaagaaa
atggagaaaaaagtcggccagattcaaacacccgcagctcccaaacaagacttcctgttc
aaagacatcttccattgcgatgatgacagtgatgaaggaggcccagaggagcccagcgcc
tctgatgtgcagtga
DBGET
integrated database retrieval system
