Mus pahari (shrew mouse): 110319037
Help
Entry
110319037 CDS
T05929
Symbol
Siglec1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110319037 (Siglec1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mpah04090
]
110319037 (Siglec1)
04091 Lectins [BR:
mpah04091
]
110319037 (Siglec1)
CD molecules [BR:
mpah04090
]
Proteins
110319037 (Siglec1)
Lectins [BR:
mpah04091
]
I-type lectins (Siglecs)
110319037 (Siglec1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_4
Ig_5
C1-set
Izumo-Ig
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
110319037
NCBI-ProteinID:
XP_021050095
Ensembl:
MGP_PahariEiJ_G0025763
LinkDB
All DBs
Position
3:complement(114193213..114211639)
Genome browser
AA seq
1703 aa
AA seq
DB search
MHLGTGMCVLFSLLLLASVFSVGQTTWGVSSPKNVEGLTGSCLLIPCIFSYPADVPVPNG
ITAIWYYDYSGKRQVVIHSGDPKLVDERFRGRAELMGNMGHKVCNLLLKDLKPEDSGTYN
FRFEISDSNRWSDVKGTTVTVTKDPSPPTITIPKELREGVEGNFNCSTPYLCLQEKQVNL
QWQGQDPTHSVTSSFQSLEPTGVYHQTTLHMVLSWQDHSRTLLCQFSLGAHSSRKEVYLQ
VQHAPKGVEILLSSSGRNILPGDPVTLTCRVNSSYPAVRAVQWARDGVDLGAEGHVLRLS
SAAWNDSGVYTCQATNDVGSLVSPPLSLHVFMAEIKMNPAGPVLENETVTLLCSTPKEAP
QELRYSWYKNHILLEDAHASTLRLPAVTRADTGFYFCEVQNAQGSERSSPLSVVVRYPPL
TPDLTTFLETQAGLVGIFQCSVVSEPLATVVLSHGGLMLASSSGENDFNPRFKISSAPNS
LRLEIRDLQPADSGEYTCLATNSLGNSMSSIDFYANVARLLISPSAEVVEGQAVTLSCRS
GLSPAPDTRFSWYLNGALLLEGSSSSLLLPAASSTDAGSYYCRTQAGPNTSGPSLPTVLT
VFYPPRKPTFTARLDSDTSGVGDGQRGILLCHVDSDPPAQLRLLHKGRVVATSLPSRCGS
CSQRTKVIRASNSLHVEIQKPVLEDEGMYLCEASNTLGNSSASASFNAKATVLVITPSNT
LREGTEANLTCNVSQEVAVSPANFSWFRNGVLWTQGPLKTVRLQPVARADAAVYACRLLI
EDGAQLSASVVLSVLYAPDPPKLSALLDVGQGHMAVFICTVDSYPLAHLSLFHGDHLLAT
NLEPQRPSHGRIQVKATANSLQLEVRELGLEDSGNYHCKATNVLGSANSSLFFQVRGAWV
QVLPSPELREGQAVVLSCQVPTGVPEGTTYSWYQDGRPLQDSTSSTLRIAAISLRQAGAY
HCQAQAPDTATASLAAPVSLRVSYTPRHVTLSALLSTGPERLGHLVCSVQSDPPAQLRLF
HQNRLVASTLQGTEELASSNPRLHVTVLPNELRLQIHFPELEDDGTYTCEASNTLGQASA
AADFDAQAVHVAVWPNATVQEGQQVNLTCLVWSTHQDSLSYTWYKGGQRLLGARSISLTS
VTVLDATSYRCGVGLPGHAPHLSRPVTLDVLYAPRSLRLTYLLETQGRQLALVLCTVDSR
PPARLTLSHGDQLLASSTEASVPNTLRLELQDPRPSNEGLYSCSAHSPLGKANTSLELRL
EGVRVKMNPSGTVPEGEPVTVTCEDPAALSPTLYAWFHNGHWLQEGPASSLQFPVTTRAH
AGAYFCQVHDVQGTRSSRPASLQILYAPRDAVLSSFRDSRTSLMVVIQCTVDSEPPAEMV
LSHNGKVLAASHEHHSSASGIGHIQVARNALRLQVQDVTVGDGNTYVCTARNTLGSISTT
QRLLTETDIRVTAEPGLDVPEGTALNLSCLLPGGSRPMGNSSFTWFWNRHRLHSAPVPTL
SFTPVLRAQAGLYHCRADLPTGATTSAPVMLRVLYPPKTPTLTVFVEPQGGHRGILDCQV
DSEPLAILTLHQGSQLVASNQPHGAPAQPHIRVTAPPNALRVDIEELGPSNQGEYVCTAS
NALGSASASAYFGTRALHQLQLFQRLLWVLGFLAGFLCLLLGLVACHTWRKKSSTKLNEN
ENEDSAEMATKKDTIQEEVVAAL
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgggaactgggatgtgtgtcctgttctccctgctcctgctggcctctgtcttc
tcagtaggccagaccacatggggtgtctccagtcccaagaatgtggagggcttgacagga
tcttgcctgctcattccctgcatcttcagctaccctgctgatgtcccagtgcccaatggc
atcacagccatctggtactatgactactcgggcaagaggcaggtggtaatccactcaggg
gaccccaagttggtggacgagcgcttcaggggccgagctgaactgatggggaacatgggt
cacaaggtgtgcaacctgttgctcaaagacctgaagcccgaagactctggcacctacaac
ttccgctttgagatcagtgatagcaaccgctggtcagatgtcaaaggcaccacagtcact
gtgacaaaggatcccagcccccccactattaccattcccaaggagctgcgtgaaggcgtg
gaggggaacttcaattgttccacaccctacctatgcctgcaggagaagcaagtaaacctt
cagtggcaaggccaggaccccacccactctgtcacctccagcttccagagcctcgagccc
actggcgtctatcaccagacgactctacatatggtcctatcctggcaggaccacagtcgg
accctgctctgccagttctcattgggcgcgcacagtagtcggaaagaggtttacctgcaa
gtgcagcatgcccccaaaggtgtggagatcctccttagctcctcagggaggaacatcctt
ccaggggatccagtcacgctcacctgcagagtgaacagcagctatcctgccgtccgtgct
gtgcagtgggccagggatggagtggaccttggagctgagggacatgtgctgaggctgtcc
tcagcagcctggaatgattctggggtctacacctgccaagcaacaaatgatgtgggctct
ctggtgtcacccccgctcagcctccatgtttttatggctgaaataaaaatgaacccggct
gggcccgtcttggaaaatgagacagtgaccctgctctgtagcaccccgaaggaggctccc
caggagctccgctacagctggtacaagaaccacattctcctggaagatgcccatgcctca
accttgcgcctgcctgcagtcacccgggctgatactggcttctacttctgtgaggtgcag
aacgcccagggcagtgagcgctccagccccttgagtgtggtggtcagatatccacccctt
actccagacctgaccaccttcttggagacacaggctggacttgtgggcatcttccagtgc
tctgtggtcagcgagcccctggctactgtggtgctgtcacacggaggcctcatgttggcc
tccagctctggagaaaatgacttcaacccccgattcaagatttcctctgcccccaactcc
ctgcgcctagaaatccgagacttgcagccagcggacagcggggagtacacgtgcttagct
accaactcccttggaaactcaatgtccagcatagacttctatgctaatgtggcccgactc
ctcatcagcccttcagcagaggttgtggaagggcaggcggtgactctgagctgcaggagt
ggtctgagtccagctcctgacactcgcttctcctggtacctgaacggagctctacttctg
gaaggatccagcagcagcctcctgctccctgcggcttccagcactgacgcgggctcatac
tactgtaggacgcaggctggccccaacaccagcggcccctccctgcctactgtcctcact
gtgttctatcccccacgaaagcccacattcactgccaggctggattcggatacctctgga
gtcggggacggacaacggggcatcctcttgtgccacgtagacagcgatcccccagcccag
ctacggcttctccacaaaggccgtgttgtggccacttctctgccatcaaggtgtgggagt
tgctcccagcgcacaaaggtcatcagagcctccaactcgctgcacgtggagatccagaag
cctgtattagaggatgagggcatgtacctgtgtgaggctagcaacacattgggcaactcc
tcggcctcagcctctttcaatgctaaggccactgtcctggtcatcacaccatcaaataca
ctgcgtgaaggtacagaggccaacctaacttgcaacgtgagccaggaggttgctgtcagc
cctgccaacttctcctggttccggaatggagtgctgtggacccagggaccactgaagact
gtgaggctgcagcctgtggccagagctgatgctgctgtctatgcctgccgcctcctcatc
gaggatggggctcagctctctgcttctgtggtcctaagtgtgctgtatgccccagaccct
ccaaagctgtcagccctcctggatgtgggtcagggccacatggccgtgttcatctgcact
gtggacagctatcccctggctcacctgtctctgttccatggggaccacctcctggccacc
aacttggaaccccagcgtccctcccatggcaggatccaggtcaaggccacagccaactcc
ctgcagttagaggtccgagaactaggtcttgaggactctggaaactaccactgcaaagcc
accaatgttcttgggtcggccaacagttcactgttcttccaggtcagaggagcctgggtc
caggttttgccatcacctgagctccgagagggccaggctgtggtcctgagctgccaggtg
cccacaggagtccccgaggggaccacatatagctggtatcaggatggccgccccctccag
gattcaacctcatctaccctccgcattgcagccataagtctgaggcaagctggtgcctac
cattgccaagctcaggccccagacacagctactgccagcctggctgcccctgtcagcctc
cgtgtgtcctataccccacgtcatgttacactcagtgccctgctgagcacgggccctgag
cgacttggccacctggtgtgcagtgtacaaagtgaccctccagcgcagctgcgactgttt
caccagaatcgcctcgtggcctctaccctacaaggcacggaggaattggcaagcagtaat
ccccggctgcatgtgactgtgctccccaatgagctgcgcctgcagatccactttccagag
ctggaggatgatgggacctatacatgcgaagccagcaacacactgggccaggcctcggct
gcagctgacttcgatgcccaggctgtgcatgtggctgtgtggcccaatgccactgtgcaa
gaggggcagcaggtgaacctgacctgcttggtatggagcacccaccaggactcactcagc
tacacatggtacaagggtgggcaacgactccttggtgccagatccatctccctgaccagt
gttacagttttggatgctacctcctaccgctgtggtgtggggctccctggccacgcaccc
catctctccagacccgtgaccctggatgtcctctatgctccccgaagcctgcggctgacc
tacctcctagagacccagggcaggcagctggccctggtactgtgtactgtggatagtcgt
ccacctgcccggctaactctcagccacggtgaccagctcctagcctcctcaactgaagcc
tctgtccccaacaccctgcgcctagagcttcaggacccaaggcctagtaatgaggggctc
tatagctgctctgcccacagccccttgggcaaggccaacacgtccctggagcttcggctg
gaaggtgtccgagtgaaaatgaatccctctggtactgtacccgagggagagcctgtcaca
gtgacctgcgaggaccctgctgccctctcacccaccctctatgcctggtttcacaatggc
cactggcttcaggagggaccggcttcctcactccagttcccggtgactacacgggctcac
gctggcgcttatttttgccaggtgcatgatgtacagggcacacggagctccagacctgcc
agtctgcaaattctctatgccccccgggatgctgtcctgtcttcctttcgagactcaagg
accagtctcatggttgtgattcagtgcactgtggacagcgagccacctgctgagatggtc
ctatcccacaatggcaaggtgctagctgccagccatgagcatcacagctcagcatcgggg
ataggccacatccaggtagcccgaaatgctcttcgactacaggtgcaagacgtgactgtg
ggcgatggcaacacctatgtttgcacagcccggaatacactgggctccatcagtaccacc
cagaggcttctgacggagactgatatacgtgtgacagctgagcccggcttggatgtgcca
gagggcacagctctgaacttaagctgcctcctccctggtggctctcggcccatgggcaac
tcttccttcacatggttctggaatcgccaccgactacattcagctcctgtgcccacactc
tccttcacccctgtgctccgggctcaggctgggttgtaccactgcagggctgatctcccc
actggggccactacctctgctccagtcatgctccgtgtcctctatcctcccaagacgccc
actctcacagtgtttgtggagcctcagggtggccaccggggcatcctcgactgtcaagtg
gacagtgagcccctggccatcctcacccttcaccagggcagtcaactagtagcctccaac
caacctcacggtgctcccgcccagccccacatccgagtcactgctcctcccaatgccttg
agagtagacatcgaggagcttggacctagcaatcaaggggagtatgtgtgcactgcctcc
aatgctctgggctctgcctcagcctccgcctactttgggaccagagctctgcaccaactg
cagctgttccagaggctgctatgggtcctgggatttctggcaggcttcctgtgcctgctg
ctgggtctggtggcctgtcacacctggagaaagaagagttctaccaagctgaatgagaat
gagaacgaggattcagcagagatggccactaagaaagatactatccaggaggaggtggtt
gccgctctctga
DBGET
integrated database retrieval system