Mus pahari (shrew mouse): 110319104
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Entry
110319104 CDS
T05929
Symbol
Tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04145
Phagosome
mpah04540
Gap junction
mpah04814
Motor proteins
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110319104 (Tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
110319104 (Tubb1)
09142 Cell motility
04814 Motor proteins
110319104 (Tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110319104 (Tubb1)
09164 Neurodegenerative disease
05010 Alzheimer disease
110319104 (Tubb1)
05012 Parkinson disease
110319104 (Tubb1)
05014 Amyotrophic lateral sclerosis
110319104 (Tubb1)
05016 Huntington disease
110319104 (Tubb1)
05020 Prion disease
110319104 (Tubb1)
05022 Pathways of neurodegeneration - multiple diseases
110319104 (Tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110319104 (Tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110319104 (Tubb1)
04147 Exosome [BR:
mpah04147
]
110319104 (Tubb1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
110319104 (Tubb1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
110319104 (Tubb1)
Exosome [BR:
mpah04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110319104 (Tubb1)
Exosomal proteins of colorectal cancer cells
110319104 (Tubb1)
Exosomal proteins of bladder cancer cells
110319104 (Tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
110319104
NCBI-ProteinID:
XP_021050190
Ensembl:
MGP_PahariEiJ_G0026202
LinkDB
All DBs
Position
3:156754790..156762243
Genome browser
AA seq
408 aa
AA seq
DB search
MREIVHIQIGQCKKYVPRAVLVDLEPGTMDSIRSSRLGVLFQPDSFVHGNSGAGNNWAKG
HYTEGAELIENVMDVVRRESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIL
NSFSVMPSPKVSDTVVEPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLRLTTPTYGD
LNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRAL
SVAELTQQMFDARNIMAACDPRRGRYLTVACIFRGKMSTKEVDQQLLSIQTRNSNCFVEW
IPNNVKVAVCDIPPRGLNMAATFLGNNTAIQELFTRVSEHFSAMFRRRAFVHWYTSEGMD
ISEFGEAESDIHDLVSEYQQFQDVRAGLEDSEEDAEEEAEMEADDKDH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattgtgcacattcagattggccagtgtaagaagtatgtgccccgagccgtc
cttgtggacctggaacctgggacaatggacagcatccgatccagcagattgggggtcctc
tttcagcctgacagttttgttcatggtaactctggtgctggtaacaactgggccaagggc
cactacacagagggagcggagctgatcgaaaatgtcatggatgtggtaaggagggagagc
gagagctgcgactgcctacagggtttccagattgtgcactctctgggtggaggcaccggc
tcaggcatgggcaccctgctcatgaacaagatcagggaggagtacccggatcggatcctg
aactcctttagtgtcatgccatcccccaaggtgtcagacacggtggtggagccctacaat
gccgtcctatccatccaccagctgatagagaacacagatgcctgcttctgcattgacaat
gaagcgctctatgacatttgtttccgcaccctgaggctgacgacacccacctacggggat
ctcaaccacctggtgtccttgaccatgagtgggatcacgacctcactgcgctttccgggc
cagctcaatgcagacctgcgcaagctggccgtgaatatggtgcccttccctcgtcttcac
ttcttcatgcctggcttcgctccactcacagcccagggtagccagcagtaccgagccctc
tcagtagcggagctcacccaacagatgttcgatgcccgcaacatcatggctgcctgtgac
cctcgccgcggccgctacctgactgtggcttgtatcttccggggtaagatgtccaccaag
gaagtggaccaacagctgctgtccattcagacaaggaacagcaactgctttgtggaatgg
attcccaacaatgtcaaggtagctgtgtgtgacatcccgccccgtgggctgaacatggca
gctaccttcctgggcaacaatacagccatccaagagctcttcaccagggtctctgagcac
ttctcagccatgttcagaaggagagcttttgtgcactggtacaccagtgaagggatggac
ataagtgaatttggggaagctgagagtgacatccatgacctggtgtctgagtaccaacaa
ttccaagatgtcagagcagggctagaggacagtgaagaggatgcagaggaggaggcagag
atggaggcagacgacaaagaccattag
DBGET
integrated database retrieval system