Mus pahari (shrew mouse): 110319156
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Entry
110319156 CDS
T05929
Symbol
Trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpah03016
]
110319156 (Trdmt1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
110319156 (Trdmt1)
Transfer RNA biogenesis [BR:
mpah03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110319156 (Trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
110319156
NCBI-ProteinID:
XP_021050250
Ensembl:
MGP_PahariEiJ_G0024644
LinkDB
All DBs
Position
3:complement(1451120..1483781)
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AA seq
415 aa
AA seq
DB search
MEPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHTHLLAKTIEGI
SLEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTNSFLYILDILPRLQKLPKYILLEN
VKGFEVSSTRGLLIQTIEACGFQYQEFLVSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPG
QILMEFPKTVTVEPQKHAVVEESKPRAKRTGPHICAESSSTQCSGKDPILFKLETVQERD
RKHQQDSDLSVQMLKDFLEDGDTDQYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSY
IEGTGSVLQTAEDVQIENIYKSLTDLPPEEKMAKLSMLKLRYFTPKEIANLQGFPPEFGF
PEKTTVKQRYRLLGNSLNVHVVAKLLTVLCEGFGNASESCHKMPRILDSNSKILS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaacctctgcgtgtcctggagctgtacagtggcattggtggcatgcaccacgcgctg
cgagaaagtcatatccctgcacatgtggtggctgctattgatgtgaatactgttgctaat
gaagtatacaagcataattttcctcatacacacttactggcaaagacaattgaaggtatt
tcactggaagagtttgacaagctatctttcaatatgattttaatgagccctccatgtcag
ccattcacaagaattggcctacagggggatatgactgatccaaggacaaatagcttcttg
tatattctagatattctcccaagattacaaaaattacccaaatatattcttttagaaaat
gtcaaaggttttgaagtatcttctacaagagggctgctgatacaaacaatagaagcctgt
ggctttcaatatcaagagtttctagtctctccttcctctctaggcattccaaactcaagg
ctacgatattttctcattgcaaagcttcagtcagagcctttccctttccaggcccctgga
cagatactgatggagtttcctaaaactgtaactgttgagccacaaaaacatgcagtagtt
gaagaaagtaagccaagagcgaagagaactggaccacatatctgcgctgagagcagcagc
acacagtgttccgggaaagatcccattctctttaagcttgaaactgtacaagaacgggac
aggaaacaccaacaagacagtgacctctctgtgcagatgctgaaagacttccttgaggat
ggcgacacagatcagtaccttctaccaccaaagttattgctgcgatatgctctcttacta
gatatcgttaagcccacgtccagaaggtccatgtgctttactaaagggtatgggagctac
atagaggggacaggctccgtgttacagactgcagaggatgtgcagattgagaatatctac
aaatctcttactgatttgccaccagaagaaaagatggctaagttgtcaatgcttaaactg
cgatatttcacacctaaagaaattgcaaatctccagggatttcctccagaatttggcttt
cctgagaagacaacagtgaagcagcggtaccggctgcttggcaatagcctcaacgtgcat
gtagtagcaaaactcctcacagtcctgtgtgaaggatttggaaatgcctctgagagctgt
cacaagatgcctcgaattctagacagtaattccaagattctatcttga
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