Mus pahari (shrew mouse): 110319234
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Entry
110319234 CDS
T05929
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110319234 (Ctcfl)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110319234 (Ctcfl)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110319234 (Ctcfl)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110319234 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_jaz
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7
Zf-C2H2_ZNF451_1st
C2CH-3rd_BIRD-IDD
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
110319234
NCBI-ProteinID:
XP_021050352
Ensembl:
MGP_PahariEiJ_G0026187
LinkDB
All DBs
Position
3:complement(155387461..155408430)
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AA seq
640 aa
AA seq
DB search
MAAAEVPVPSGHFTQIKEQTLKPGDLEEEKEEDGVQRVEAQEGAVEEAEAENSCLLLEAR
APVESDRPILTLQTVHLESQDVHLQGLGWLSVPHSEELPGMVPETEGILQLPSVLWLDTE
SQLSLQHCLTVSIPEELYPPEELELIHFHLLRENVLVAEENQELTPNLDESMALKKPEDD
EKDQLPPQGETDQKEERFLLVEMKPEEGKDEIVLTISHLNLEEQQDPPAAKQTSGPRAQA
AKPQRQSKGKPQTFQCDTCPFTSSKLSTFNRHVKIHSNERPHLCHLCLKAFRTATLLKNH
VNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCKYASVEASKMKRHIRS
HTGERPFQCCQCAYASRDSHKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHIAQKHGE
NVPKYECPHCATIIARKSDLRVHLRNLHSHSPEEIKCRYCPAGFHERYALIQHQRTHKNE
KKFKCKQCDYACKQERCLKAHMRMHTGETPFSCLACNKRFQQKQLLTAHLRKDHDPSFVP
NLHLCLKCDKRFSRWSNLQRHRKKCDPEHETLAPNKDRRTQASERGAGHEEDVATQERTP
SGEPQCPGEQALGHQGELAVGSQSPDHGLTCEMIFNMMDK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgaggtccctgtcccttctgggcacttcacccagatcaaagagcagacg
ttgaaacctggagacctagaggaggagaaagaggaggacggggtacaaagagtggaagct
caggagggagctgtcgaggaggcggaggctgagaacagctgcctgcttctggaggccagg
gccccggtggagagcgatcggccgatactgaccctgcaaaccgtgcacctggagtcccag
gatgtgcacctacaggggctgggatggctgagcgtgccacactccgaggagctgccaggg
atggtaccagagacggaaggcatactgcagttgccatccgtgctgtggctcgacacagag
tcccagctcagccttcagcattgcctgacggtcagcatcccggaagagctgtacccacca
gaggaactggagctgatacattttcacctgctgagagagaatgtgctagtggccgaggag
aaccaagagttaacgccaaacttggatgaaagcatggccctgaagaagcccgaagatgat
gaaaaggaccagctcccgccccagggagagacggaccagaaagaagagagattcctcctt
gtggagatgaaaccagaagaaggaaaagacgaaattgttctgaccatttcccatctaaac
ctagaagaacagcaagatccaccagcggcgaagcagacaagtgggccgagagcccaagcc
gcaaaaccacagaggcagtccaaggggaaacctcagacctttcagtgcgacacctgcccg
ttcacttcctccaagctctcaactttcaatcgtcatgtcaaaattcacagcaatgagcgg
ccacacctgtgccacctgtgcctaaaggccttccggaccgccacactccttaagaatcac
gtgaatacccacacaggaaccaggccctacaaatgcggggactgcgacatggcgtttgtc
accagcggagaactcgtccggcacaggcgttacaaacacactcatgagaagcccttcaag
tgctccctgtgcaagtatgccagcgtcgaggcaagcaagatgaagcgccacatccgctca
cacacgggtgagcgacccttccagtgctgccagtgtgcttatgccagcagggactcccac
aagctgaagcgccacatgaggacacactcaggtgagaagccatacgaatgtcccacctgt
cacgtccggttcacccagagcgggaccatgaaaatccatatagcacagaagcatggagag
aatgtgcccaaatacgagtgtccccactgtgccaccatcattgcgaggaagagcgacctg
cgtgtccatctgcgtaacctgcacagccacagccccgaggagatcaagtgccgatactgt
cccgctggcttccatgagcgctatgccctcattcagcaccagaggacccacaagaatgag
aagaagttcaagtgcaagcagtgtgattacgcgtgcaagcaggagcgatgcttgaaggcg
cacatgcgcatgcacacaggagagacgcccttctcctgcctggcctgcaacaagcgcttc
caacagaagcagctacttacggcgcacctgaggaaggaccatgacccaagcttcgtcccc
aacctgcacctgtgcctcaagtgtgataaacgcttctcccgctggagtaacctgcagaga
cacagaaagaagtgcgacccggagcatgagacgttagcccccaacaaggacaggaggaca
caggcctcggagagaggagcaggacatgaggaagatgttgccacccaggagaggaccccc
tcaggggaacctcagtgccccggggagcaagctctgggccaccaaggagaactcgcagtg
gggagccagagcccagaccatggcctcacctgcgagatgatctttaacatgatggataag
tga
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