Mus pahari (shrew mouse): 110319308
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Entry
110319308 CDS
T05929
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04068
FoxO signaling pathway
mpah05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
110319308 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
110319308 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110319308 (Rag1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110319308 (Rag1)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110319308 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110319308
NCBI-ProteinID:
XP_021050462
Ensembl:
MGP_PahariEiJ_G0025438
LinkDB
All DBs
Position
3:complement(85719633..85731291)
Genome browser
AA seq
1040 aa
AA seq
DB search
MAASLPSNLRLSSAPDEIQHPQIKFSEWKFKLFRVRSFEKAPEEAQKEKDSSEGKPYLEQ
SPVVPEKPGGQNSILTQRALKLHPKFSKKFHADGKSSDKAVHQARLRHFCRICGNRFKSD
GHSQRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARIFRIDVKADVDSIHPTEFCHDCWS
IMHRKFSSAHSQVYFPRNVTVEWHPHTPSCDVCFTAHRGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVLKKISNCSKIHLSTKLLAVDFPAHFVKSISCQICEHILADP
VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPAQEC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTVMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELTLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPTK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKSSGFTMNSKE
TLGDPLGIEDSLESQDSMEF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccttgccatctaacctgagactcagctctgcaccggatgaaattcagcac
ccacaaatcaaattctccgagtggaaatttaagctgtttcgggtgagatcctttgaaaag
gcacccgaagaagcacaaaaggagaaggattcttcagaggggaaaccttatctagagcag
tctccagtagttccagagaagcctggtggtcagaactcaattctgacccaacgtgcactg
aaactccatcctaaattttcaaagaaattccatgctgatgggaagtcaagcgacaaagca
gttcaccaagccagacttagacacttctgccgcatctgtgggaatcgtttcaagagcgac
gggcacagccagagatacccagtccacgggcccgtggacgctaaaacccaaagccttttc
cgaaagaaggaaaaaagagtcacttcctggccagacctcattgccaggattttccggatc
gatgtgaaggcagatgttgactccatccatcccacagaattctgccatgactgctggagc
atcatgcacagaaagttcagcagtgcccacagtcaggtctacttcccaaggaatgtgacc
gtggagtggcacccccacacaccgtcctgtgacgtctgtttcactgcccatcggggactg
aagaggaagagacatcagcccaatgtgcagctcagcaagaaactaaaaactgtgcttaac
cacgcgagacgggaccgtcgcaagagaactcaggccagggtcagcagcaaggaagtcctg
aagaagatctccaactgcagtaagattcatctcagtaccaagcttcttgcggtggacttc
ccagcacactttgtgaaatccatctcctgccagatatgcgaacacattctggctgatccc
gtggagaccagctgcaagcacctattctgtaggatctgcattctcagatgcctcaaagtc
atgggcagctattgtccctcttgccgatatccgtgcttccctactgatctggagagtccg
gtgaagtcctttctgagcatcttgaattctctgatggtgaagtgtcccgcgcaagagtgc
aatgaggaagtgagtctggaaaaatataaccaccacgtctcaagccacaaagaatctaaa
gagactttggtgcatatcaataaggggggacggcctcgccagcatctcctgtcactgaca
cgaagggcgcagaaacatcggctgagggagctcaagattcaagtcaaagaatttgctgac
aaagaagaaggcggagatgtgaaggctgtgtgcttgacgttgttcctcctggcactgagg
gcgaggaatgagcacaggcaagctgacgagctagaggccatcatgcaaggccggggctcc
gggcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagccaa
taccataagatgtacaggactgtgaaggctatcactgggaggcagattttccaacctttg
catgctcttcggaatgccgagaaagtccttctgccaggctaccacccctttgagtggcag
cccccactgaagaacgtgtcttccagaactgatgttggaattattgatgggctgtctgga
cttgcctcctctgtggatgagtacccagtagataccattgcgaagaggttccgctatgac
tctgctttggtgtctgctttgatggacatggaagaagacatcttggaaggcatgagatcc
caagatcttgatgactacctgaatggtcccttcacagtggtggtaaaggagtcttgcgat
ggaatgggggatgtgagtgagaagcacgggagtgggcccgcagttccagaaaaggccgtt
cgtttctctttcacggtcatgaggattacgatagagcatggctcgcagaacgtgaaggtg
tttgaggaacccaagcccaattctgaactgtgttgcaagccgttgtgtcttatgctggca
gatgagtctgaccacgaaacccttactgctattctaagccccctcattgccgagagggag
gccatgaagagcagtgaattaacgctggagatgggaggcatccccaggacttttaagttc
atcttcaggggcactggatacgatgaaaaacttgtccgggaagtagaaggcttggaagct
tctggctcagtctacatctgtacactttgtgacgccacccgtctggaagcctctcagaat
cttgtcttccactccataaccagaagccacgctgagaacctgcagcgctatgaggtctgg
cggtccaatccctaccacgagtcggtggaagagcttcgggaccgggtgaagggggtctct
gccaaacctttcatcgagacagtcccttccatagatgcacttcactgtgacattggcaat
gcagctgaattctataagattttccagctggagataggggaagtgtataaaaatcccaat
gcctctaaagaggaaaggaagagatggcaggccaccctggacaaacatctccggaaaagg
atgaacttaaaaccaatcatgaggatgaacggcaactttgcccggaagcttatgacccaa
gagactgtagacgcagtttgtgagttaattccttctgaggagcggcatgaagctctcagg
gagctgatggacctttacctgaagatgaaacccgtgtggcgctcatcatgtcccactaaa
gagtgcccagagtccctctgtcagtacagtttcaactcgcagcgttttgccgaactcctc
tccaccaagttcaaatatagatacgagggcaagatcaccaattactttcacaaaaccttg
gcacatgtccctgaaattattgaaagggatggctctattggggcatgggcaagtgagggg
aatgaatctggtaacaagctctttagacgcttccggaaaatgaatgccaggcagtccaag
tgctatgagatggaagatgtcctgaaacatcactggctgtacacttcaaaatacctccag
aagtttatgaatgctcacaacgcattaaaaagctctgggtttaccatgaactcaaaggag
accttaggggaccctttgggcattgaggactctctggaaagccaagattcaatggagttt
taa
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integrated database retrieval system
