Mus pahari (shrew mouse): 110319569
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Entry
110319569 CDS
T05929
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
mpah05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110319569 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110319569 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110319569 (Ss18l1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110319569 (Ss18l1)
GBAF(ncBAF) complex
110319569 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
110319569
NCBI-ProteinID:
XP_021050708
Ensembl:
MGP_PahariEiJ_G0026216
LinkDB
All DBs
Position
3:162324238..162347644
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtcggcgcggccgagaggcaaaggggaggtcactcagcagacc
atccagaagatgctggatgagaaccatcacctgatccagtgcatcctggactaccagagc
aagggcaagacagccgagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggccaccatagcagactccaaccagaacatgcagtctctgcttcccgcgcctccaaca
cagaacatgaacctcgggcccggagcactaagtcagagcggttccagccagggcctgcac
cctcagggcagcctcagtgataccgtcagcacaggcctgccccccgcctccctcatgcag
ggccagatcggtaacggtccaaaccacgtgtccatgcagcagacggctcagagcacactg
cccacaacctccatgagcttgtcaggcagtggccatggtaccggccctgggtacagccac
tcgggacctacctcgcagagtgtccccatgcaaggccaaggtgccatcagcaactatgtg
tctcggaccaacatcaacatgcagtccaacccagtctccatgatgcaccagcaggcagcc
acgtcccactacaactcagcacagggtggaagccagcattaccagggccaggcacccatt
gccatgatgggccagggtggtcaaggaggcagcatgatggggcagcggcccatggcgccc
tacagaccctcccagcaaggctcttcccagcagtacctgggccaagaggagtactacagc
gaacagtacagccacagccagggctccgcagagcccatgagtcaacagtactacccagat
ggccacggtgactacgcctatcagcagtcgtcctacacagagcagagctatgaccgctcg
tttgaggaccccacacagcactactacgaggggggaaactcccagtacagtcagcagcag
gctgggtaccagcagggcacagcacagcagcagacctactcccagcagcagtatcccaac
cagcagagctacccggggcagcagcagggctatggtcctgcccagggagccccctcacag
tactcaagctaccagcaaggacaaggtcagcagtatggaagttacagaacatcgcagacg
ggaccttctgcccagcagcagcggccttacggctatgaacagggccagtatgggaattac
cagcaataa
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integrated database retrieval system
