Mus pahari (shrew mouse): 110319637
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Entry
110319637 CDS
T05929
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110319637 (Gapvd1)
Membrane trafficking [BR:
mpah04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110319637 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
110319637
NCBI-ProteinID:
XP_021050798
Ensembl:
MGP_PahariEiJ_G0024923
LinkDB
All DBs
Position
3:complement(21963932..22049979)
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AA seq
1458 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDQLKEDRMALDNLLANLPQAKPGKSSSLDMTPYSTPQMSPATTPANKKNRLPI
ATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDDIAHGAHPLTSPPSQSESLLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHVLTAAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEELPPAAATGATSLVAAPHSSSSSPSKDSSRGETEE
RKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDEPSPRL
SAQAQVAEDILDKYRNAIKRTSPSEGAMANDESAEVMGDGESAHDSPREEALQNISADDL
PDSASQAAHPQDSAFSYRDVKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEIVC
FLKVQIAEAINLQDKSLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRC
RQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADD
KTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILR
DQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRM
CSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEESYW
WMQFTAAVEFIKTIDDRK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcacacattggcccaccacctcaagcaggagcgcttatatgtg
agctctgagaaacagctcattcagaggctaaatgctgatgtactgaagacagctgaaaag
ctgtatcgaacagcgtggattgcaaagcaacagaggattaatttggatcgtcttattata
accagcgctgaagcttcccctgctgagtgttgccagcatgccaagattttggaagataca
cagtttgttgatggatacaagcaactgggatttcaggaaacagcttatggagaattcctg
agtcggttgagagaaaatccacgtcttattgcctcctctttggttgctggagaaaaactc
aatcaggagaacacacaaagtgttatctacactgtttttacctccttgtatggcaactgt
attatgcaagaagatgaaagctacctccttcaggttttacgatacttgattgaatttgaa
ctaaaggaaagtgacaaccccaggcgccttttgaggagaggaacttgtgccttcagcatc
ttatttaaactcttttctgaaggactgttttctgccaaacttttccttacggctactttg
catgagccaatcatgcagctcctcgtagaggatgaagaccacctggaaacagatgcaaac
aagctaatagagagattctctccagctcagcaggaaaaactctttggagagaaaggctca
gatagatttaggcaaaaggttcaagaaatggtagattccaatgaggctaaattagtggct
ttggtgaacaaatttattggttatcttaaacagaatacatactgctttccacatagtttg
aggtggattgtgtcacagatgtacaaaactctttcttgtgtggacagattagaggttggg
gaggtcagagcaatgtgtaccgatcttctgttggcttgcttcatttgtcctgcagttgtc
aatccagagcagtatggaataatatctgatgctcctattaatgaggtggcaagatttaac
ctgatgcaggttggccgccttttgcagcagctagcaatgactggcactgaagaaggagat
ccccggaccaaaaatagccttggaaaatttgacaaaggctgtgtcgctgctttccttgat
gttgtaattgggggccgtgcagtggagactccgccaatgtcctctgttaatcttctggaa
ggcttgagcagaactgtggtgtatataagttacagtcagcttattactctggtaaatttt
atgaagagtgtgatgtctggagatcaattgaaagaagatagaatggctcttgacaatttg
ttggcaaatctgccccaggctaagccggggaagagcagcagtctggacatgactccctat
agcactcctcagatgtctccagcaaccactccagccaacaagaagaatcgattacctata
gcaactcggagcagaagccgaagtaatatgctaatggacctacatatggaccatgaagga
tcatctcaagaaaccatccaggaggtacagccagaagaggtgctggtcatttccttaggg
acagggcctcagctcactccagggatgatgtcagaaaatgaggttctaaacatgcagctt
tcggatggaggacaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggcatatctgaaggtccttcc
aaccgctccaattcagtgtcttctctcgacctggaaggagaatctgtatctgaacttggg
gcagggccttctgggagtaatggagttgaagcactgcagctgctagaacacgagcaagct
acaacacaagataatctggatgataaactgaggaagtttgagattcgtgacatgatggga
ctaacagatgacagggacatatccgagacggtgagtgagacctggagcactgatgtcctt
ggaagtgactttgacccgaacgttgatgaagatcgtttgcaagagattgcaggtgcagca
gcagagaatgtgttaggcagtttgctgtgccttccaggttcagggtcagttctccttgac
ccttgcactggttctaccatatcagagaccacaagtgaagcttggagtgtagaggtattg
ccaagtgactcagaggctccagacttaaagcaggaagagcgcctccaagagctggagagc
tgttctggactgggcagcacatctgatgatacagatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtccggtataagtgctacatcggaggatattcccaat
aagatcgaagatctgagatctgagtgcagctctgattttgggggtaaagattctgtaact
agtccagatatggatgacatagcccatggcgctcatccgctgacctctcctccctctcag
tcagagtctctgctggccatgtttgatccactgtcctcacatgaaggggcctctgctgtg
gtaaggccgaaggttcactatgcccgaccctcgcatccacctccggatcctccaatcctg
gaaggtgcagtgggaggaaatgaggccaggttgccaaactttggttctcacgttttaact
gcagctgaaatggaggcattcaagcagaggcactcttaccctgagagactcgttcgcagc
agaagctctgatatagtatcttctgtgcggcggcccatgagtgaccccagctggaaccgc
cgtccagggaatgaagaactccctccggctgcggccactggtgctacttctttggtggct
gcacctcactcatcatcttcgtccccgagtaaggactcttctagaggagagaccgaggaa
cgcaaggacagtgacgatgagaggtcagacaggagcaggccttggtggaggaagcgcttt
gtttcagctatgcctaaagctcctataccatttagaaagaaagaaaaacaagaaaaagac
aaagatgatctgggtcctgacagattctcaacactcacagatgagcccagccctaggctc
agtgctcaagctcaggttgctgaagatattctggacaaataccggaatgccattaaacgg
accagccccagtgaaggagcaatggcaaatgacgagagtgcagaggtcatgggtgatggt
gaaagtgctcatgactctcctcgtgaagaagcactgcagaacatctcggccgacgatctc
ccagactctgccagccaagcagctcacccccaggactctgctttctcttacagagatgta
aaaaagaagctgaggctcgcactttgctctgcagactctgtggccttcccagtgctaact
cattcaacaaggaacggattgccagatcatacagacccagaagacaatgaaattgtgtgc
ttcttaaaagttcaaatagctgaagcaattaatttacaagataagagcttaatggctcaa
cttcaagaaacaatgcgttgtgtgtgccgctttgacaataggacttgtaggaagttgctg
gcatccattgctgaagactacagaaaaagagctccatatattgcttatcttacccgctgc
cgacaaggactgcagaccacacaggctcacttggaaaggctcttgcaaagagttttgcgg
gacaaagaggtggccaatcggtactttaccactgtctgtgtgaggttactgcttgagagc
aaagagaagaaaatcagggagttcattcaagactttcagaaacttactgctgctgatgat
aaaacggcacaggtggaggattttctacagttcctgtatggtgcgatggctcaggatgtc
atatggcagaatgccagtgaggagcagctgcaggatgcccagctggccattgagcggagt
gtgatgaatcggatcttcaagcttgctttctaccctaaccaggatggggacatacttcgt
gaccaggttctgcatgaacatatccagagattatctaaagtagtgactgcaaaccacaga
gctctgcagatccctgaggtttatcttcgtgaggcaccgtggccatctgcacagtcagaa
atcaggacaataagtgcttacaaaaccccccgggacaaagtgcagtgcatcctgagaatg
tgctccaccatcatgaacctcctgagcctggccaatgaggactctgtccctggggcagat
gactttgttcctgtgttggtgtttgtgttgataaaggcaaacccaccctgcctgttgtcc
actgtgcagtacatcagcagtttctacgccagctgtctgtctggagaggagtcctattgg
tggatgcagttcacagcagccgtggagtttattaaaaccatcgatgacagaaagtga
DBGET
integrated database retrieval system
