Mus pahari (shrew mouse): 110319659
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Entry
110319659 CDS
T05929
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110319659 (Ighmbp2)
03012 Translation factors [BR:
mpah03012
]
110319659 (Ighmbp2)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110319659 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
110319659 (Ighmbp2)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
Other ribosome biogenesis factors
110319659 (Ighmbp2)
Translation factors [BR:
mpah03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110319659 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
ResIII
zf-AN1
DEAD
nSTAND3
AAA_16
AAA_22
SLFN-g3_helicase
Helicase_RecD
UvrD-helicase
IstB_IS21
AAA_25
PhoH
Flavi_DEAD
AAA
Zot
DnaB_C
ABC_tran
UvrD_C_2
T2SSE
NTPase_1
DAP3
Motif
Other DBs
NCBI-GeneID:
110319659
NCBI-ProteinID:
XP_021050842
Ensembl:
MGP_PahariEiJ_G0013960
LinkDB
All DBs
Position
1:complement(114669188..114689914)
Genome browser
AA seq
991 aa
AA seq
DB search
MASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQRTGLY
GQRLLTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDES
HDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSTPSPAPE
IAPLSFYNTTLDPSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC
APSNIAVDNLVERLALCKKRILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDID
QVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASADGPL
RLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHRAALAGLSRS
LMERLAEKHGAGVVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVTDT
EETRVPLLLIDTAGCGLLELEEEDNQSKGNPGEVRLVTLHIQALLDAGVQAGDIAIIAPY
NLQVDLLRQSLSSKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAV
TRARRHVAIICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHSR
APKPKCPSTSIRKPASDQESGQETRAAPGHGRRKPSEKPPGSQVQSQHSSSANGSDRTGG
TDRTEHFRAMIEEFVASKEAQLEFPTSLSSHDRLRVHQLAEEFGLRHDSTGEGKARHITV
SRRSPAGAGSVAPQPPSPPSPAQAEPEPQAEEPIAQAHGPAQLDLKALHLERLQRQQSCQ
TQTAKSQPGGGSRPQKAPQKKKKKEPKGPAMALSCEEDFDALVSAVVRADNTCSFSKCSA
STTTLGQFCMHCSHRYCLSHHLPEIHGCGEKARAHARQRISREGVLHAGSGTKDRALDPA
KRAQLQRRLDKKLGELSSQRASKKKEKERGT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtccaccgtggagagtttcgtggcccagcagctacagctgctggagctggag
cgggacgccgaggtggaggagcgcaggtcctggcaggaacacagttctctgaaagagctt
cagagccgaggggtgtgcttgctgaagcttcaggtctccagccagcgcaccgggctgtat
gggcagcggctgctcacctttgagcccaggaagtttgggcctgcggtggtgcttcccagc
aacagcttcacctctggtgatattgtgggtctgtatgatactaatgaaaacagccaactg
gccactggggtcctgacccgcatcacccaaaaatcagtcacagtggcctttgatgagtcc
catgatctccagctgaacctggacagagagaatacctacagactgctgaagcttgccaac
gatgtcacctacaaacgcctgaaaaaagcactgatgacactgaagaagtaccactctggg
ccagcatcctcgctcatagacgtcctgttgggcggctccaccccaagtcctgccccggaa
atagcccctctctctttctacaacacaaccctggacccttcccagaaggaagctgtgtcc
tttgcactggcccagaaagaacttgccatcatccacgggcctcctggcactgggaaaacc
acaactgtggtggaaataatccttcaagctgtgaagcaaggcttaaaggtcctgtgctgt
gctccctccaacatcgctgtggacaacctggtggagcgcctggctctgtgcaagaagcgg
attctgcgcctgggtcaccctgcccgcctcctggagtccgttcagcagcactcactggac
gcagtgctagcacgcagtgacaacgcccagattgttgctgacatcagaagggacatcgac
caggtctttggcaagaacaaaaagacacaggataagagagagaaaggtaattttcgaagt
gaaattaagctgctgaggaaggaactgaaggagagggaagaagcagccatagttcagagc
ctcactgcagcagatgtggtcctagccaccaacacaggtgcatcggctgatggccctttg
aggctgctgcctgaggactactttgatgtggtggtggtggacgagtgtgcccaggcccta
gaagccagctgctggatccccctgctgaaggccccaaagtgcatccttgctggagaccac
aaacagctgccacccaccaccgtctctcacagggcagcactggctgggctgtcccgcagc
ctgatggagcgtctggcagagaagcatggggctggcgtggtgaggatgctgacggtacag
taccgaatgcaccaggccatcacgcgctgggcctcggaagccatgtaccacgggcagctt
actgcccatccctctgtggcaggacacctcctaaaggacctcccaggtgtgactgacaca
gaggagacacgtgtcccgctgctgcttatagacaccgctggctgtgggctgctggagctg
gaggaggaggacaaccagtccaaaggaaacccgggcgaagttcgcctcgtcactttgcac
atccaggctctgttggatgctggggtccaggcaggtgacattgccatcatcgcaccctac
aaccttcaggtggatctgctcagacagagcctctccagtaagcaccctgagctggagatt
aagtcggttgatggctttcaaggccgagagaaggaggctgtgatcctgaccttcgtcagg
tccaataggaaaggtgaagttggttttctggctgaggacaggcggatcaatgttgctgtt
acccgtgctcggcggcatgtggcaatcatctgtgattcccacactgtcaacaaccatgcc
tttttgaagaccttggtggattatttcacagagcatggggaggtacgcacagcctttgaa
tacctggatgacatcgtccctgagaactacacccatgagggctcccagggccacagccgt
gcccccaaacccaagtgccccagcacctccatcaggaagcctgccagtgatcaggagagt
ggccaggagaccagagcagcccctggacacggccgcaggaagccaagcgagaagcccccg
ggctctcaagtccagtcccagcacagctccagtgcaaatggctctgacagaactggaggc
acagaccggacagagcacttcagggctatgattgaagagtttgtggccagcaaggaggcc
cagttggagtttcccacatccctgagctcccatgacaggctgcgcgtccaccagttagct
gaggagttcgggctgaggcatgacagcaccggggaggggaaggctcggcacatcacagtg
agcaggaggagccctgccggggctggcagtgtagccccacagcctccctcaccgcccagc
cccgcacaggctgagcctgagcctcaggccgaggagcccatcgcacaggcgcatggcccc
gcacagctggatctgaaggcgctgcatctggagaggctgcagcggcagcaaagctgccag
actcagacagccaagagtcagccaggcgggggctcgaggccacagaaggcgccacagaag
aaaaagaaaaaagaaccaaaaggtccagccatggctctgtcctgtgaggaggactttgat
gccctcgtgtctgctgtggtgagggctgacaacacctgtagcttctccaagtgctcagcc
agcaccaccactctgggccagttctgcatgcactgtagccaccgctactgcctcagccac
catctgcctgagatccatggctgtggagaaaaggctcgtgcccatgcccggcagaggatt
agccgggaaggagtgctgcatgcaggcagtgggaccaaggacagagccctggacccggcc
aagagggcccagctgcagaggaggctggacaagaagctgggtgagctcagcagccagagg
gcaagcaagaagaaggagaaggagagggggacgtga
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