Mus pahari (shrew mouse): 110319761
Help
Entry
110319761 CDS
T05929
Symbol
Fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110319761 (Fxr1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110319761 (Fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
110319761 (Fxr1)
mRNA cycle factors
Stress granule specific factors
110319761 (Fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
Tudor_2
Motif
Other DBs
NCBI-GeneID:
110319761
NCBI-ProteinID:
XP_021050958
Ensembl:
MGP_PahariEiJ_G0026371
LinkDB
All DBs
Position
4:28550326..28600996
Genome browser
AA seq
677 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESAEAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEREKGYATDESTVSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRETRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSEKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLPRTPGEEKTK
TLKEDSTQEAAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgtccacgaagactccctcacagttgtttttgaaaataattggcaaccagaacgt
caggttccgtttaatgaagtacgattaccaccaccacctgatataaaaaaagaaattagt
gaaggagatgaagtagaggtatattcaagagcaaatgaccaagagccatgtggatggtgg
ctggctaaagttcggatgatgaaaggagagttttatgtcattgaatatgctgcttgcgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaagtgcacagtggatgttcctgaagatttgagagaagcg
tgtgctaatgaaaatgcccataaagattttaagaaagcagtaggagcgtgcagaatcttt
tatcatcctgaaactacccagttaatgatactgtcggccagtgaagcgactgtgaagaga
gtaaatatcttaagtgatatgcatttgagaagtattcggacgaagttgatgcttatgtcc
agaaatgaagaggccacaaagcatttagaatgcacaaaacaacttgcagcagcttttcat
gaagaatttgttgtgagagaagatttaatgggcctggcaataggaacgcatggtagtaac
atacagcaagctaggaaggttcctggagttactgccatcgagttagatgaagacaccgga
acatttagaatctatggagagagtgctgaggctgtaaaaaaagcgagaggtttcttggaa
tttgtggaagattttattcaagttcccaggaatcttgttggaaaagtaattggaaaaaat
ggcaaagttattcaggaaatagtggataaatctggtgtggttcgagtaagaattgaagga
gacaatgaaaataaactacctagagaagatggaatggttccatttgtatttgttggcact
aaagaaagtattggaaatgtgcaagttcttctagagtatcacatcgcttacttaaaggaa
gtggaacaactaagaatggaacgtctgcagattgatgagcaactgcgacagattggtatg
ggtttcagaccttcttccaccagagggcctgaaagagagaaaggatatgccactgatgaa
agtaccgtctcttctgtacaaggttctaggtcttatagtggaagaggcagaggtcgtcgg
ggccctaattacacctccggttatggtacaaattctgagctgtctaacccctccgaaaca
gaatctgagcgtaaagatgagctgagtgactggtcattggcaggagaagatgatcgagag
acacgacatcagcgagacagcaggagacgcccaggaggaagaggcagaagtgtttctggg
ggacgaggtcgtggtggaccacgtggtggcaaatcctccatcagttctgtgctcaaagat
ccagacagcaatccatacagcttacttgataatacagaatcagatcagactgcagacact
gacgccagcgaatctcaccacagtactaaccgtcgtaggcggtctcgtagacgaaggact
gatgaagatgctgtactgatggatggaatgactgaatctgatacagcctcagttaatgaa
aatgggctagatgatagtgaaaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgt
ttcaggggtcaggcagaagatagacagccagtcacagttgcagattatatttctagagct
gagtctcagagcagacaaagaaacctcccaagggaaactttggctaaaaacaagaaagaa
atggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaataaatggtccaact
agcgcttctggcgatgaaattcctaagctaccgcgtactccaggagaagaaaagactaag
accttaaaagaagacagcactcaagaagcagcagtcctgaatggtgtttcataa
DBGET
integrated database retrieval system
