Mus pahari (shrew mouse): 110319773
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Entry
110319773 CDS
T05929
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110319773 (Sema6c)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
110319773
NCBI-ProteinID:
XP_021050982
Ensembl:
MGP_PahariEiJ_G0026776
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All DBs
Position
4:85375931..85389348
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AA seq
962 aa
AA seq
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MPRAPHSMPLLLLLLLSSLPQAQAAFPQDPTPLLTSDLQGASPSSWFRGLEDDAVAAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDMENCAVRGKLTDE
CYNYIRVLVPWNSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSTVAI
FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFF
REVSVEDARLGRVQFSRVARVCKRDTGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPV
SEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGMAGPHRNATVLFLGSNDGTVLKVLPPGGQSPGPEPIVLEEIDAYSHARCS
GKRSPRAARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWH
RFRGCMSIRGPGGTDVDLTGNQESTEHGDCQDGATGSRSGPGDSAYVLLGPGPSPETPSS
PSDAHPGPQSSTLGAHTQGVRRDLSPASASRSIPIPLLLACVAAAFALGASVSGLLVSCA
CRRANRHRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAQTPQLYTTFLPPPE
GGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGNNASEGPSRPPRGCSGAGGPAPR
VLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSEPLAPAPFTSRPPVSEPGAALFV
DSSPMPRDGVPPLRLDVPPDGKRAAPSGRPALSAPAPRLGVGGSRRLPFPTHRAPPGLLT
RVPSGGPARYSGGPGRHLLYLGRPDGHRGRSLKRVDVKSPLSPKPPLASPPQPAPHGGHF
NF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccccactccatgcccctgctgctgctgctgctgctgtcatcgctcccc
caagcccaggctgcctttccccaggaccccacccctctgttgacctctgaccttcaaggt
gcctctccatcatcctggttccggggcctggaggacgatgctgtggctgcggaacttggg
ctggactttcagagattcctgaccttgaaccggaccttgcttgtggctgcccgggatcac
gttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagttt
ctgacatggaggagccaagatatggagaactgcgcagtccggggaaagctgacggacgaa
tgctacaactacatccgtgtccttgttccctggaactcgcagacactccttgcctgtgga
acaaattccttcagccctatgtgccgcagctatgggataacatctctgcaacaggagggt
gaggagctgagtgggcaggcgcgatgcccctttgatgccacccagtccactgtggccatc
tttgcagagggcagtttgtactcagccacagcagcagatttccaggccagtgatgctgta
gtttacagaagtcttggacctcagcccccactccgttctgcaaagtatgactccaagtgg
ctgcgagagccacactttgtctatgctttggagcatggagaacatgtctacttcttcttc
cgagaagtctctgtggaggatgcccgcctggggagggtgcagttttccagggtagcccgg
gtgtgtaaacgtgacacgggtggctcacctcgggccttggatcgccactggacatccttc
cttaagctgaggctcaactgctctgtccctggggactctaccttctactttgacgtctta
cagtccttaactgggcctgtgaacctgcatggccgctctgctctctttggggtcttcact
actcagaccaatagcattcctgggtctgcggtctgcgccttctacctagatgatattgaa
cgtggctttgagggcaagttcaaggagcagaggagtctggatggggcctggactcctgtg
tctgaggacaaggtcccctcacccaggccaggatcctgtgcaggtgtgggtgcagctgct
tcattctcctcctctcaagacctaccggatgatgtcctgctcttcatcaaggcacacccg
ctgctggatcctgccgtgccacccgccacccatcaaccgctcctcactctgactagcagg
gccctgctgacccaggtggctgtggacggtatggctggtccccacagaaatgccactgtc
ctgtttctcggctccaacgatgggacagtgctgaaggtgctacctccagggggacagtct
ccaggacccgagcctatcgtcttggaagagattgatgcctacagccatgcccggtgcagt
gggaagcggtcaccccgagctgcgcggcggatcatagggctggagctggatactgagggt
cacaggcttttcgtggcctttcctggatgtattgtctacctctctctcagccggtgtgcc
cggcacggggcttgtcagaggagctgcctggcttctctggacccatactgtggatggcat
cgattcagaggctgcatgagtatccggggacctggtgggactgatgtggatctaactggg
aaccaggaatccacagagcacggtgactgccaagatggagcgaccgggagtcggtctggc
cctggagattctgcttatgtgcttctgggtcctggcccttcccctgagacccccagttcc
cccagtgatgcccacccagggccccagtcttccactcttggagctcacacgcagggcgtg
cgcagggacctttccccagcctcagcctcccgatccatccccatcccactcctcctggcc
tgtgtggcggcggccttcgctttgggcgcctcagtctccggcctcttggtgtcctgtgct
tgtcgtcgtgcgaaccgccatcggagcaaggacatcgagaccccggggctgccgcggccc
ctctcccttcgcagcctggcgcggctgcacggtggcggtcctgagcccccgcctccgccc
aaggatggagatgcagcacaaacgccccagctctacactaccttcctgcctccgcccgag
ggcggatccccaccggagctggcctgcctgcccacgccggagacgacgcccgagctgccg
gtgaagcacctccgtgcctccgggggtccctgggagtggaaccagaacgggaacaacgcc
tcggagggcccaagccgcccaccacggggctgcagcggggcgggcgggcccgcaccccgc
gtgctggtgaggccaccgccccctggctgccccgggcaggcggtagaggtgaccacgctg
gaggaactgctgcgctacctgcacggtccgcagccgcccaggaagggcagcgaacctctc
gcccccgccccgttcacctcccggccgcccgtctcggagcccggcgccgcgctgttcgtg
gactccagcccgatgccgcgggatggcgtgccgccgctgaggctcgacgtgccgcccgac
ggcaagcgcgccgccccgagcgggcggcctgctctctcggccccggctccgcgcctgggc
gtcggcggcagccgcagattgcccttccccacacaccgggcgcccccgggcctgctcacg
cgagtgccctcggggggtccggccaggtactccggggggcccgggaggcacctcctgtac
ctcggccggcccgacggtcaccgcggccgctccctgaagagggtggacgtgaagtctccg
ctgtcgcccaagccgcccctcgcctccccgccgcagcccgccccgcacggcggtcatttc
aacttctga
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