Mus pahari (shrew mouse): 110319776
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Entry
110319776 CDS
T05929
Symbol
Pogz
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110319776 (Pogz)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110319776 (Pogz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-POGZ
DDE_1
zf-C2H2_Z280C_D
HTH_Tnp_Tc5
zf-C2H2_4
HTH_23
HTH_28
Motif
Other DBs
NCBI-GeneID:
110319776
NCBI-ProteinID:
XP_021050994
Ensembl:
MGP_PahariEiJ_G0026761
LinkDB
All DBs
Position
4:85055016..85101920
Genome browser
AA seq
1409 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTSVSVSQQPVSAPVPIAAHAS
VAGHLSTSTTVSSSGAQNSDSTKKTLVTLIANNNAGNTLVQQGGQPLILTQNPAPSLGTM
VTQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQ
TVRPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRST
VPQSQSQQTKSTPSTSTTPTATQPTSLGQLAGQPPGQSNQTSNPKLAPSFPSPPAVSIAS
FVTVKRPGVTGENSNEVAKLVNTLNTVPSLGQSPGPVVVSNNSSAQRTSGPESSVKVTSS
IPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDAEPSVPLAAKP
SSPEKTAPVTSTPSSTPIPALSPPTKVPEPNENAGDAVQTKLIMLVDDFYYGRDGGKAAQ
LTSFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPF
QLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYS
EVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKI
EHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVSSNDAPSGTLQEAAALTSTDP
LPVFLYPPVQRNIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSR
AYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFATSVGDAMAKHLVFNPSHRSSN
ILPRGLSWMSHSRSGQAPERVFDRSMKNTYLPPPLVPNKAATVKPVGATPAEPQELAGPV
LQALPSPASTATPPATPTHPQPSALPPLATEGTECLNVSEQEEGSPVTQDPEPASGGGGG
SGVGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLS
FEAEEKLAEWVLIQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHLTPH
ARRAVAHTLPKHVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSSDDRKE
NALQTVGTGEPWCDVVLAILADGTVLPTLVFFRGQANRLANVPDSILLEAKDSGYSDDEI
MELWSTRVWKKHTACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAVVPAGCSSKIQPL
DVCIKRTVKNFLHKKWKEQAREMADAACDSDVLLQLVLVWLGEVLGVIGDSPELVQRSFL
VASVLPGPDGNVNSPTRNADMQEELIASLEEQLKLNGEQSEEHSASAPRPRSSPEETVEP
ESLHQLFEGESETESFYGFEEADLDLMEI
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgacctgtttatggaatgtgaggaggaggaactggagccatggcagaaa
atcagtgatgtcattgaggactctgtagttgaagattacaattcagtggataaaactact
tccgtttctgtgagccagcagccagtctcagctccagtgcccattgctgcccatgcttct
gttgctgggcacctctcaacatccactactgttagtagcagtggggcacagaacagcgac
agtacaaagaagactcttgtcacactaattgccaacaacaatgctggtaatactttggtc
cagcaaggtggacagccactcatcctcacccaaaacccagcaccaagtctgggaacaatg
gttactcaaccagtattgagacctgtccaggtcatgcagaatgccaatcatgtgactagc
tcccctgtggcctcacaacctatcttcatcactacccagggatttcctgtaaggaatgtt
cggcctgtacaaaatgcaatgaatcaggttgggattgtgctgaacgtacagcaaggccaa
acagttagaccaattacattggtcccagccccaggtacacagtttgttaagccgacagtt
ggcgtcccacaagtgttctctcagatgacccccgtgaggccaggctccacaatgcctgtg
aggcccaccaccaacacctttaccaccgtcatcccagctactctcaccatccgaagcact
gtcccacagtcacagtcccagcagaccaagtccacccccagtacctccactactcccact
gccacacagccaacctcactggggcagctagctggtcagcctccaggccagtccaaccag
acctcgaatcccaaactagctccctccttcccctctccacctgcagtgagcattgccagc
tttgtcactgtgaagcgacctggggttacaggtgaaaatagcaacgaagtggccaaattg
gtgaatactcttaacactgtcccttccctgggccagagtcctgggcccgtggtggtgtcc
aacaacagttctgctcaaagaaccagtggacctgaatcttcagtgaaagtgacctcttcc
atcccagtgtttgacctccaggacggtggacggaaaatatgtccacggtgtaatgctcag
ttccgtgttactgaagctttgagaggtcacatgtgttactgctgccctgaaatggttgag
taccaaaagaaaggcaagtccctcgatgcagagcccagtgtcccattggcagcaaagccc
tcatcccctgagaagacagcccctgttacttccacaccctcctctacaccaattcctgct
ctctcaccacctaccaaagtaccagagccaaatgaaaatgctggagatgctgtccagacc
aagcttatcatgctggtcgatgatttttactacggacgggatgggggcaaagcagcccag
ctcacaagctttcctaaggttgccacgtctttccgatgccctcattgtactaaaagacta
aagaacaacattcgattcatgaaccacatgaagcaccacgtagaacttgatcaacagaat
ggtgaggtggatggtcacactatctgccaacactgttaccgccagttctccacccccttc
cagctccagtgccacttggaaaatgttcatagtccctatgaatctactaccaagtgcaag
atctgcgagtgggcctttgaaagcgagcccttgttcctacagcacatgaaggacacgcat
aagcctggagagatgccttatgtttgtcaggtgtgtcagtatcgctcctccctctactct
gaggtagatgtccattttcggatgatccatgaagatactcggcatttgctttgcccgtat
tgcctaaaagtcttcaaaaatggcaatgccttccagcaacactacatgaggcaccagaag
agaaatgtttatcactgcaacaaatgccggctgcagtttctctttgccaaggacaaaatt
gaacacaagctgcagcaccataaaaccttccgtaagcctaagcagctggaaggcttgaaa
ccaggcaccaaggtgacaatccgggcttcccggggacagccgagaactgttcctgtgtct
tcaaatgatgcaccttctggcaccttgcaggaggcagcagcgctgacctccactgacccc
ctacctgtcttcctttatcctcctgtccagcgcaatatccagaagagagctgttaggaaa
atgagcgtcatgggccggcagacatgtctggagtgcagctttgagattccagatttccct
aatcatttccctacctatgtgcattgttctctctgtcgatacagcacctgctgctctaga
gcttacgccaatcacatgatcaacaatcatgttccgcggaaaagtcccaagtatttggct
ttgtttaaaaattctgtaagtggaatcaagctggcctgcacttcgtgtacctttgctacc
tccgtgggagatgccatggccaagcatttagtgttcaacccctcccacagatctagcaac
atcttaccacgggggctcagttggatgtctcactcgaggtctggccaggctcctgaacga
gtgttcgaccggagcatgaagaatacatatcttccacctccccttgtccctaacaaagct
gccactgtgaagcctgtaggagccaccccagcggagccccaagaactggcagggcctgtg
ctccaggcacttccatccccagcctcaactgcaaccccaccagcaacccccactcaccca
cagccttccgccctgccacccttggccacagaggggactgagtgtctgaatgtcagtgaa
caggaagaaggaagccctgtcacccaggatcctgagccagcatcaggtggtggaggtggc
agtggggttggcaagaaagagcagctgtctgtgaagaagcttcgggttgtactgtttgcc
ctgtgctgcaacactgaacaggcggctgaacattttcgaaacccccagcggcgaatccgt
cgttggcttcgacgcttccaggcctctcagggagagaacttagagggcaaatatctcagc
tttgaggcagaagaaaaactggctgaatgggtgctgatccagagagagcagcagctccct
gtaaatgaagagaccttgtttcagaaggccaccaaaattggacgctctttggaaggggga
tttaagatctcctatgagtgggctgtgcgcttcatgcttcggcaccacctcactccccat
gcccggcgagctgtagcccacacgttaccgaagcatgtagcagaaaatgctggactcttc
attgagtttgtgcagcggcagattcacaatcaggacttaccgttgtctatgattgtggct
attgatgagatctctttgttcttggacacagaggtgctgagcagtgatgaccgaaaggag
aacgctctgcagacagtgggcacaggggagccttggtgtgacgtcgtgctggctatccta
gcagatggcactgtcctccccaccctggttttcttccgaggacaagcgaatcggctcgct
aatgtaccagactctattttactagaggccaaagacagtggctacagtgacgacgaaatc
atggagctttggtcgacccgtgtatggaagaagcacacagcttgtcagcacagcaaaagc
atgttggtgatggactgccatcgcactcacttgtcagaggaggtgctggccctgctcagt
gcctctagcactttgcccgcggtagtccctgccggttgtagctccaaaatccagccacta
gatgtatgcatcaaacgaactgttaagaacttcctgcacaaaaagtggaaggaacaggct
cgggaaatggcagatgctgcttgtgattctgatgtcttgcttcagctggtgttggtctgg
ctgggtgaggtgctgggtgtcattggggactccccagagctagttcagcggtccttcctt
gtggctagtgttctgccaggtcccgatggcaacgttaactcacccacacgcaacgctgac
atgcaggaggagctcattgcctccctagaggagcagctaaagctaaatggagaacagtct
gaggagcactcagcctctgccccccgacccaggtcatctcctgaagagacagtcgagcct
gaaagccttcaccagctttttgagggggaaagtgagacggagtctttctatggctttgag
gaagctgaccttgatctgatggagatctag
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integrated database retrieval system
