Mus pahari (shrew mouse): 110319864
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Entry
110319864 CDS
T05929
Symbol
Supt20h
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110319864 (Supt20h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110319864 (Supt20h)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110319864 (Supt20h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
110319864
NCBI-ProteinID:
XP_021051184
Ensembl:
MGP_PahariEiJ_G0026431
LinkDB
All DBs
Position
4:47767851..47804168
Genome browser
AA seq
731 aa
AA seq
DB search
MQQALEQALDRAEYIVESAQQRPPKRKYLSSGRKSIFQKLYDLYVEECEKEPEVKQKLRR
NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLVCDVHS
ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSVAVACTANRLLYNRQKMNTRPMKRCLK
RSSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
LAVPSEVDVEKYAKVEKSIKSDDSQPTMWPAHDVKDDYVFECEGGNQYQKTKLTILQSLG
DPLYYGKIQPWKADEENDSQMSPSHSSADDHSNWFVIGSKTDAERVVNQYQELVQNEAKC
PVKMSHSSSGSAGLSPGEEAEAETSSIQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTA
QQASSFLKSPTPPPSSKPSLSRKSSVDLSQVSMLSPAALSPASSSQRSTLSPVMADSAGL
NSVSVVSSAGGAQALKSGSNSMLGCDTGAIPPAGKSLCSGLLPSGGLVADTLPSASTLQA
APQAGIPFGLKNTSSLRPLNLLQLPGGSLIFNTQQQQQQPQLSHFIQPPQQPAASGSQQP
EEQGCEQGLTTQEQALTAQQAAVLNLTGVGGFTQSQAAAVAILAAPNGYGSSSRTNSPAT
PPPAHRQPVKE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagctctagaacaagctttggatcgtgcagagtacatcgtcgaaagtgctcag
cagaggcctcctaaaaggaaatacctgtctagtggaagaaaatctatatttcaaaaactt
tatgacttatatgttgaagaatgtgaaaaagaacccgaggttaagcagaaattaagaaga
aatgtgaacttgttagagaagcttgttatgcaggagactttgtcatgtttagtagtcaat
ctgtacccaggaaatgaaggctattctctgatgctcagggggaagaacggatcagattct
gagaccatccgattgccttatgaagaaggggaattgcttgaatacttagatgcagaagaa
ttacctcctattttggttgatctccttgaaaaatcacaggttaatatttttcattgcgga
tgtgtgatagcagaaatacgtgactataggcagtccagtaatatgaagtctcctggttac
caaagtaggcacattctcttacgtccaacaatgcagactttagtctgtgatgtccattct
ataacaagtgacaaccataagtggacccaggaagacaaacttttgcttgagagccagctg
attctagctacagcagaaccactgtgtcttgacccatctgtggcagtagcatgcactgca
aataggctgctctataaccggcaaaagatgaacacgcgcccaatgaaacggtgtttgaag
aggtcctcgaggtcctccctgaaccggcagcaggacctctctcactgtcctcctccccct
cagctgagattacttgatttcttacaaaagcggaaggaaaggaaagcaggccagcattat
gacctcaaaatttccaaagcaggaaattgtgtagacatgtggaaacggagcccctgtaac
ttggctgtgccttctgaagtagatgtggaaaaatatgctaaagtggagaaatccatcaaa
tctgatgactcacagccaacaatgtggccagctcatgatgtaaaagacgattatgtattt
gaatgtgaaggtggtaatcagtatcagaaaacaaagctgaccatcttgcagtctcttggt
gatccgctttactatggtaaaatacagccgtggaaagcagatgaagaaaatgacagccaa
atgtctccatcccactcctctgctgatgaccattcaaactggtttgtcattggttcaaag
actgacgcagagagggtagttaatcagtaccaggagttggtccagaatgaagccaaatgc
ccagtgaagatgtcacacagcagtagtggttcagccggtctcagtccaggggaggaggct
gaagcggagacctcgtccattcagtcttcggttttgggaaagggagtaaaacatcgaccc
ccacccatcaaacttccctcaagttcaggaaatagttcctcaggtaactatttcacagca
cagcaagccagcagcttccttaaatctccaactcctcctccatcatctaaaccgagcctt
tctcggaagtcatctgtggatctcagtcaagttagcatgctttctcctgctgccctgtca
cctgccagctcatcccagagaagcacgctctccccggtcatggcagactctgctgggctt
aactccgtcagtgtagtgagctctgctggtggagcccaggctctgaagagtggctcaaac
tccatgctgggctgtgacactggggccatacctcctgcagggaaaagcctgtgcagtggc
cttctgccatcaggaggtctcgtagcagacacactgcccagtgccagcaccctacaggcg
gctcctcaagcaggtatcccatttggtttaaaaaatacttcaagtctcaggcctttaaat
ctactccagcttcctggtggttcactcatttttaacacccagcagcaacagcagcagccg
cagctctctcactttatacaaccacctcagcagcctgcagcttcaggttcccaacagcca
gaggagcagggttgtgaacaagggttaactactcaagaacaggccttaaccgctcagcaa
gctgctgttctcaacctcactggagtaggaggctttacccagtcacaggcagccgcagtt
gcgattcttgcagcaccaaatggctatggcagcagcagccgcacaaacagcccagctaca
ccgccaccggcacacaggcagccagtcaaagagtaa
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