KEGG   Mus pahari (shrew mouse): 110319924
Entry
110319924         CDS       T05929                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110319924 (Hltf)
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110319924 (Hltf)
Enzymes [BR:mpah01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110319924 (Hltf)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110319924 (Hltf)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    110319924 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD ResIII zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-Nse zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 110319924
NCBI-ProteinID: XP_021051312
Ensembl: MGP_PahariEiJ_G0026323
LinkDB
Position
4:15707065..15764078
AA seq 1003 aa
MSHTFTRGAVWKYLQSVQYGSHENIPRLSYPTFLPRFEFQDIMPPDDSLTSDEEQDLVLF
GTMRGQVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKRELAAAVA
YIMDNKLAQVEGVVPFGASNTFTMPLHMTFWGKEENRKVVLDQLKEHGFKLGPTPKTLGS
SLENARGSGRAGPSYSRPAHAAVQMTTAQLKTEFDKLFEDLKEDDRTVEMEPAEAIETPL
LPHQKQALAWMIARENSTELPPFWEQRNDLYYNTITNFSVKERPENVHGGILADDMGLGK
TLTAIAVILTNCDDGGPLLSGRGEKTHPGKEYKDETIKLRGSNMNKKEDGHSESSTCGEE
PSISGTPEKSSCTVSELSSVCPKRRKITVQYIESSDSKEIETSELPQKMKGKLKNAQLNT
KSRVKGSSKVKEDKKFLLNFFASATKKKMLKTGTSMTEGSKACDTGERTRTTLIICPLSV
LSNWIDQFGQHVKSEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYSVLTHDYGTKDDSPL
HSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKLK
PFIDREWWHRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQ
HITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGM
SSSGPSRSDTPEELRKMLIEKMKLILSSGSDEECAICLDSLAFPVITHCAHVFCKPCICQ
VIQSEQPHAKCPLCRNEIHVDNLLECPPEELACDSDRESSMEWKSSSKINALMHALIELR
TKDPSIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPT
IMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSV
EENMLKIQNTKRELAAGAFGTKKTDASEMKQAKINEIRTLIDL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgtcccatacgttcacgaggggtgctgtttggaagtatttgcagtctgtccagtatgga
tcccatgaaaatattccaagactttcatacccaactttcttgccacgttttgaattccaa
gacattatgcctccagatgactccctaactagtgatgaagagcaagatttagttttattt
ggaactatgagaggacaagttgttggattacgctattacacaggagttgtaaataataat
gaaatggttgctttacaacgagagcctaataatccctatgataagaatgctattaaagta
aataatgtgaatggaaatcaggttggccatttaaagagagagcttgcagctgccgtggcc
tatatcatggacaacaaattggcacaagtggaaggtgtagttccttttggtgcaagtaat
acttttaccatgccgcttcatatgactttctggggaaaagaagaaaatagaaaagtggtt
ttagatcagttgaaagaacatggatttaagttgggtcccacaccaaaaactttagggtcg
agtttggagaatgcacggggctctggaagagctggaccaagctatagtaggccggctcat
gctgcagtgcagatgacaactgcacagctcaaaacggaatttgacaaattatttgaagat
ttaaaagaagatgatagaactgttgaaatggaaccagctgaggctattgaaacaccattg
cttccacaccaaaaacaagctctagcttggatgattgcacgagagaacagcacagagcta
ccaccattctgggaacagcgcaatgacttatattataatacaataacaaatttttctgtg
aaggaacgaccggaaaatgttcatggaggaattttagctgatgatatgggtttgggcaaa
actcttactgccattgctgtaattcttaccaactgtgatgatggcgggcctctcctcagt
gggagaggtgagaagactcatccaggaaaggaatacaaggatgagaccattaaactcaga
ggaagtaatatgaacaagaaggaagatggacactcagagtcatccacgtgtggtgaagaa
cccagtatttcaggtactccggagaagagtagctgtactgtgtcagaactgtctagtgtc
tgccctaagagaagaaaaattactgtacagtacattgaaagtagtgattcaaaggaaatt
gagacaagtgaactgccccagaaaatgaaaggcaagctgaaaaatgcacagttaaatact
aaaagtagagtaaaaggatcatctaaggttaaagaagataaaaaatttttacttaatttt
tttgcttctgcaacaaaaaagaaaatgttgaaaacaggcacgtctatgacagagggctca
aaggcatgtgacactggagagaggacaaggacaacgctgatcatctgtccactctctgtg
ctgagcaactggattgaccagtttggacaacatgtaaaatcagaagtgcacttgaatttt
tatgtttattatggtcctgatcgtattagagattcagcctggctttcaaaacaggatatt
attttgactacttacagtgttttaactcatgattatggaactaaagatgatagtccatta
catagcatcaagtggttaagggtgatcctggatgaaggccatgccattcgaaatccaaat
gctcagcagacaaaagctgtacttgagttagaggcagaaagaagatgggtattgacaggt
actcctatccagaattctttaaaggacttatggtctcttctgtccttcttaaaacttaaa
ccatttattgatagagagtggtggcataggatcatacagcgtcctgtcactacaggagat
gagggaggacttaggcgtttacagtccttaataaaaaatatcacgcttagaagaacaaag
acaagcaaaattaaagggaaacctgttttggagttgccagaaaggaaagtatttattcag
catattactctgtcagaagaagagagaaagatttatcaatctgttaaaaatgaaggcaaa
gctgccattggaaggtattttactgaagggactgtccttgcacactatgcagatgtcttg
ggtcttctgcttagattgcggcagatttgttgccatacccatcttcttacaaacggaatg
tcttcaagtggcccctccagaagtgatactcctgaagagctgaggaagatgttaatagag
aagatgaagttaattctgagctctggttcagatgaagaatgtgcaatctgcctggactcc
ttagcatttcctgtgataacccattgtgcacatgtgttctgtaaaccttgtatctgtcag
gtcattcagagtgagcagccacatgcaaagtgtcctttgtgcagaaatgagatacatgta
gataatctattagaatgtcctccagaagaattggcatgtgacagtgacagagagtccagt
atggaatggaagtccagctcaaagattaatgctctaatgcatgctttgattgaattacgg
acaaaggaccccagcataaaaagtttagttgtttctcagtttaccacattcctgtcttta
atagaaacacctcttagagcctcaggatttgtgtttactcgcttagatggttccatggct
cagaagaaaagagttgaatcaattcagtgttttcaaaacacagaagcaggatctcctacg
ataatgctactgtccttaaaggcaggtggagtcggcttaaatctctgtgcagcttctcga
gtgttcttaatggatcccgcctggaaccctgctgcagaagaccagtgctttgaccggtgc
catcgacttggccagaaacaagaggttatcatcacaaaattcattgtgaaggactccgtt
gaagaaaatatgttgaaaatacaaaacacgaaacgagaacttgcagctggagcctttgga
actaagaaaacagacgccagtgaaatgaagcaagctaaaatcaatgaaatcagaacctta
attgacttataa

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