Mus pahari (shrew mouse): 110320025
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Entry
110320025 CDS
T05929
Symbol
Hcn3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110320025 (Hcn3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110320025 (Hcn3)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
110320025 (Hcn3)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
110320025
NCBI-ProteinID:
XP_021051528
Ensembl:
MGP_PahariEiJ_G0026632
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All DBs
Position
4:complement(79588380..79601271)
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AA seq
779 aa
AA seq
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MEEEARPAVGAGEAATPARETPPAAPAQARAASGGVPESAPEPKRRQLGTLLQPTVNKFS
LRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKEE
NSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSI
PVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHA
LFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRG
LVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGAR
DTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAM
DRLRRIGKKNSILQRKRSEPSPGSSGGVMEQHLVQHDRDMARGVRGLAPGTGARLSGKPV
LWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPATLLARSARRSAGSPASPLVPVR
AGPLLARGPWASTSRLPAPPARTLHASLSRTGRSQVSLLGPPPGGGARRLGPRGRPLSAS
QPSLPQRATGDGSPRRKGSGSERLPPSGLLAKPPGTVQPPRSSVPEPVTPRGPQISANM
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcgcggccggcggtgggggccggcgaagcggcgacccctgcacgcgag
acgcctcctgcggctcccgcccaggcccgcgcggcctcaggtggggtgccagagtctgcg
ccggagccgaagaggcggcagctcgggacgctgctgcagccgacggtcaacaagttctct
ctccgggtcttcggcagccacaaagcagtggaaatcgagcaggagagggtgaagtccgcc
ggggcctggatcatccacccctacagcgacttccggttttactgggatctgatcatgctg
ctgctgatggtggggaacctcatagttctgcctgtgggtatcactttcttcaaggaggag
aactctccaccctggatcgtcttcaatgtcctctctgacactttcttcctgctggatctg
gtgctcaacttccgaactggcatcgtggtggaggaaggtgccgagatcctgctggcacca
agggccatccgaacgcgttacctgcgcacctggttcctggttgacctgatctcctccatc
cctgtggattatatcttcctagtggtggagctggagccacgactagatgctgaggtctac
aaaacggcacgggccctgcgcatcgttagattcaccaagatccttagcctgctgcggctg
ctccgcctctcccgcctcatccgctacatacaccagtgggaggagatctttcacatgacc
tacgacctggccagcgcagtggttcgcatcttcaacctcattggaatgatgctgctgctg
tgtcactgggacggctgtctgcagtttctggtccctatgctgcaggacttcccttctgac
tgctgggtctccatgaaccgcatggtgaaccactcgtggggccgccagtattcccacgcc
ctgttcaaggccatgagtcacatgctttgcattggctatgggcagcaggcaccagtaggc
atgcctgacgtctggctcaccatgctcagcatgattgtgggcgccacgtgctatgccatg
ttcatcggtcacgccactgccctcatccagtccctggactcttcccggcgacagtaccag
gagaagtacaagcaggtggagcagtacatgtccttccacaagctgcccgctgacacccgg
cagcgcatccacgagtactacgagcatcgctatcagggcaagatgtttgatgaagagagc
atcctgggggagctgagcgagccacttcgggaggagattattaacttcacctgccggggc
ctggtggcccacatgccgctgtttgctcatgctgaccccagcttcgtcaccgcagtgctc
accaagctccgttttgaggtcttccaaccaggggacctggtggtgcgtgagggctccgtg
ggcaggaagatgtacttcatccagcacgggctgctcagtgtgctggcacggggcgcccgc
gacactcgcctcactgatggatcctactttggggagatctgcctgctgactcgaggtcgg
aggacagccagtgtaagggctgacacctattgtcgcctctactcgctcagtgtggaccac
ttcaatgcggtgcttgaggagttcccaatgatgcgcagggcttttgagactgtggccatg
gaccggcttcggcgcatcggcaaaaagaattcgatattgcagcggaaacgctctgagccg
agtccaggcagcagcggtggcgtcatggagcagcatttggtacagcacgacagagacatg
gctcgtggtgttcggggcctggctcctggcacaggagctcgactcagtggaaagccagtg
ttgtgggaaccactggtgcacgcccctctgcaggcagctgctgtgacctccaacgtggcc
atagccttgactcaccagcgaggccctctgcccctctcccctgattctccagccaccctc
ctggctcgatctgctagacgctcagcaggctccccagcctccccactggtgcctgtccga
gcaggtcctctgctggctcggggaccctgggcgtccacttctcgcctgcctgctccacct
gcccgaaccctccatgccagcctatcccggacagggcgttcccaggtgtctctgttgggc
cctcccccaggaggaggtgctcggaggctaggacctcggggccgcccactctctgcctct
caaccctctctgcctcagcgagcaacaggggatggctctcctaggcgtaaaggctctgga
agtgagcgcctgcccccctcggggctcctggccaagcctccagggacagtccagccaccc
aggtcatcagtgcctgagccagttacccccagaggaccccaaatttctgccaacatgtga
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