Mus pahari (shrew mouse): 110320059
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Entry
110320059 CDS
T05929
Symbol
Nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110320059 (Nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110320059 (Nlgn1)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
110320059 (Nlgn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
110320059
NCBI-ProteinID:
XP_021051592
Ensembl:
MGP_PahariEiJ_G0026330
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Position
4:complement(20411058..21278711)
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AA seq
863 aa
AA seq
DB search
MALPRCMWPNYVWRAMMACVVHRGSGAPLTLCLLGCLLQTFHVLSQKLDDVDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVCPQN
IIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKHTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKV
GCNVSDTVELVECLQKKPYKELVDQDVQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDITLRPTRKNSTPVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAPEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDVPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcccagatgcatgtggccaaattatgtttggagagccatgatggcatgtgtg
gtccacaggggatcaggtgctccattgactctctgcttgttgggatgtttgctacagact
tttcacgtactctctcaaaagttggatgatgtagacccattggttactactaactttggc
aagattaggggaattaagaaagaactcaacaatgaaattttgggtcctgtcattcagttt
cttggggttccatatgccgctccaccaacaggagaacatcgtttccagcctccagaacca
ccatctccctggtctgacatccggaatgccactcagtttgctcctgtgtgtccccagaat
atcattgatggcaggttgccggaagttatgcttcctgtgtggttcactaataacttggat
gtggtttcatcatacgtccaagaccagagtgaagactgtctatacttaaacatctatgtc
ccaaccgaagatgtaaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaata
tgtagaaaaggaggtccccttacaaagaaacacacagatgatttaggtgataatgacggt
gctgaagatgaagatattcgggacagtgggggtcccaaaccagtgatggtgtacatccat
ggcggctcttacatggaaggtactggaaatctgtatgatgggagtgtcttggcaagctat
ggcaatgtgatcgtcatcacagtcaactatcggcttggggtacttggcttcttgagcaca
ggggatcaggctgccaaaggaaactacgggctccttgacctcatccaggccctaagatgg
accagcgagaacattgggttctttggtggtgaccccttgcgaatcactgtgtttggatca
ggcgctgggggttcttgtgtcaatctgctgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaacgagcaatagctcagagtggaacagccctt
tccagctgggctgttagtttccagcctgcaaaatacgctagaattctggccacaaaagtt
ggctgcaatgtatcagatacagtagagttagtagaatgcctgcagaagaagccttacaaa
gaacttgttgatcaagatgttcaaccagcccgataccacatagcctttggacctgtgatc
gatggtgatgtaataccagatgaccctcagatactgatggaacaaggagagttcctcaac
tatgatataatgttgggagttaaccaaggggaagggttgaagtttgttgaaaatatagta
gatagtgatgatggtgtatcagccagtgatttcgactttgctgtttctaattttgttgat
aatttatatggatatcctgaaggcaaagatgttttgagagaaaccattaaattcatgtat
actgactgggctgatcgccataaccctgaaactagaaggaagacattgttggctttgttt
acggaccatcagtgggtggcaccggctgtggctacagcagaccttcactcgaactttggc
tcacctacatacttctatgccttttatcatcattgccaaacagatcaagttccagcttgg
gctgatgcagctcacggggatgaggttccctatgtgttgggaatccccatgattggccct
acagagttatttccttgcaatttctccaagaatgatgtgatgttgagtgccgtagtaatg
acatactggacaaattttgctaaaaccggtgacccaaatcaaccagttcctcaagacaca
aaattcattcataccaaacccaaccgctttgaagaagtagcatggaccagatattcccag
aaagaccaactttatctccacattggtttaaaaccgagagttaaagagcattacagagcc
aataaggtaaatctctggctggagctggtacctcatctgcataatctcaatgacatttct
cagtatacctcgacaacaactaaagtgccatccacggacatcactctcagacctacaagg
aagaattccacaccagtcacatcagcctttcccactgccaaacaggatgatcccaagcaa
cagccaagtcccttctcggtggatcagagggactactccacagagctaagtgtcactatc
gcagtgggagcctctctgttgtttctgaacatcttggcttttgccgccctgtactacaag
aaggataagaggagacatgatgttcaccggaggtgcagccctcagcgcacgaccaccaat
gacctaacccatgctccagaagaggaaatcatgtcactccaaatgaagcacactgacttg
gatcacgagtgtgagtccatccatccacatgaggtggttcttcggaccgcctgcccccca
gattatactctagctatgaggaggtcacctgatgatgtgccgttaatgacacctaacacc
atcacaatgattcccaacactataccagggattcagcccttacatacattcaacacattt
actggaggacagaataatacactgccccatccccacccgcacccccattcacattcaaca
accagggtatag
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