Mus pahari (shrew mouse): 110320069
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Entry
110320069 CDS
T05929
Symbol
Dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110320069 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110320069 (Dhx36)
03012 Translation factors [BR:
mpah03012
]
110320069 (Dhx36)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110320069 (Dhx36)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110320069 (Dhx36)
Translation factors [BR:
mpah03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110320069 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
AAA_23
DUF6782
ResIII
Motif
Other DBs
NCBI-GeneID:
110320069
NCBI-ProteinID:
XP_021051612
Ensembl:
MGP_PahariEiJ_G0026476
LinkDB
All DBs
Position
4:complement(54894754..54933787)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSYDYHQSWSRDGGPRGSGQGSSGGGGGSRGSGGGGGGGGRGGRGRHPAHLKGREIGLWY
AKKQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGYGT
EVSSEKKINSEKKLDNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENEPNLGLDQQLLE
DLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD
NYIERGKGSACRVVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS
ILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMS
ATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYIPEQKEHRSQFKRGFMQGH
VNRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEE
EDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRK
IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV
QPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEA
VVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS
FKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFL
SSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKI
RLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVS
PYCLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIECPHP
VDWDDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQDGYYS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactatcatcagagctggagccgcgacgggggcccacggggctccggccag
ggctccagcggcggcggcggagggagccggggctccggcggcggcggcggcggagggggc
cgcggcggccggggccggcatcccgcacaccttaagggtcgcgagatcggcctgtggtac
gccaagaagcagacgcagaagaacaaggaggctgagagacaggagagagctgtagtacac
atggatgaacgtcgagaagagcaaatagtgcagctgctgaattcagtccaagctaagaac
gataaagattcagaagcacagatatcctggtttgctcctgaggatcatggatatggtact
gaagtttcttcagagaaaaaaataaactcagagaagaaacttgataaccaggaaaagaaa
ttgctgaaccaagaaaaaaagacatttaggatcacagacaaatcatacattgaccgagat
tctgagtatttattgcaagaaaatgagccaaacctaggcttagatcaacaattattggaa
gatttacaaaggaaaaaaactgaccctcggtatatagagatgcagcgtttcagaaaaaag
ctgccttcatatggaatgcagaaggagctggtaaatttaatcaataaccatcaggtgaca
gtgataagtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggat
aactacatcgaaagaggaaaagggtctgcctgcagagtagtgtgtactcagccaagaaga
atcagtgccatttcagttgctgagagagtggccgcagaaagagcagagtcttgtggcaat
ggtaatagtactggataccagattcgtcttcaaagtcggttgccaaggaaacaaggttct
atcttatactgcacaacaggaatcattcttcagtggctgcagtcagactcacgtttgtcc
agtgttagtcatattgtacttgatgaaattcatgaaaggaatctacagtcagatgtttta
atgactgttattaaagatcttctccattttcgatctgatctcaaagtaatattgatgagt
gcaaccttgaatgctgagaaattttcagaatattttggtaactgcccaatgatacatata
cccgggtttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataaga
tatattccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcat
gtaaatagacaagaaaaagaagaaaaagaggccatctataaggaacgctggccagcttat
ataaaggaactgcggacaagatactctgcaagtaccgtagatgttttgcaaatgatggat
gatgataaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaa
gaggatggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgat
ctcttgatgtcacaagtgatgtttaaatcagataagtttctcattatacctttacactca
ctgatgcctaccgtcaaccagacacaggtatttaaaaaaactcctcctggtgttcggaaa
atagtaattgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgta
atagatggagggaaaattaaagaaacacactttgacacacagaacaacatcagtaccatg
tctgctgagtgggttagtaaagctaatgccaaacagaggaaagggagagctggaagagtt
cagcctggtcactgctatcatctgtataatggtcttagagcaagtcttctagatgactac
caactaccagaaattttgagaactcctttggaagaactttgtttgcaaataaagatcttg
aggctgggtggaattgcttattttctgagtagattaatggatccaccatcaaatgaagca
gtagtgctctccataaaacacctaatggaactgagtgctttggataagcaagaagaattg
acacctcttggtgtccatttagcccgactgcctgttgagccacatattggaaaaatgatt
ctctttggagctttgttctgttgcttagatccagttctcaccattgctgccagtctcagc
tttaaagatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaa
gaactggcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggctgg
gaagaagccaaacgacgtggtttcaggtatgaaaaggactactgctgggaatattttctg
tcttcaaacacactacagatgctgcataacatgaagggacagtttgctgagcatcttctt
ggagctggatttgtaagcagtagaagtcccaaagatccaaaagctaatataaattcagat
aatgagaagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatc
cgactaaatttgggtaaaaaaaggaaaatggtaaaagttcacacgaagtctgatggtctg
gtttctattcatcctaagtctgtcaatgtggagcagacagacttccactacaactggctt
atctatcacctgaagatgagaacaagcagtatatacttgtacgactgtacagaagtttca
ccatactgcctcttgttctttggaggagatatttccatccagaaagataaggatcaggaa
attattgctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgtt
aagggactcagaaaggaactggatagccttctacaagagaagattgaatgccctcatcct
gtagactgggacgatactaagtcaagagactgtgcagtactgtcagctattctagacttg
atcaaaactcaagaaaaggctactccaaggaacttgccaccacggtcacaggatggatat
tatagctga
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