Mus pahari (shrew mouse): 110320096
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Entry
110320096 CDS
T05929
Symbol
Psmb4
Name
(RefSeq) proteasome subunit beta type-4
KO
K02736
20S proteasome subunit beta 7 [EC:
3.4.25.1
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03050
Proteasome
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110320096 (Psmb4)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110320096 (Psmb4)
05012 Parkinson disease
110320096 (Psmb4)
05014 Amyotrophic lateral sclerosis
110320096 (Psmb4)
05016 Huntington disease
110320096 (Psmb4)
05017 Spinocerebellar ataxia
110320096 (Psmb4)
05020 Prion disease
110320096 (Psmb4)
05022 Pathways of neurodegeneration - multiple diseases
110320096 (Psmb4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110320096 (Psmb4)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mpah03051
]
110320096 (Psmb4)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110320096 (Psmb4)
Peptidases and inhibitors [BR:
mpah01002
]
Threonine peptidases
Family T1: proteasome family
110320096 (Psmb4)
Proteasome [BR:
mpah03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
110320096 (Psmb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
110320096
NCBI-ProteinID:
XP_021051657
Ensembl:
MGP_PahariEiJ_G0026762
LinkDB
All DBs
Position
4:complement(85104589..85107097)
Genome browser
AA seq
264 aa
AA seq
DB search
MEAFWESRAGHWAGGPAPGQFYRIPSTPSGLMDPASAPCEGPITRTQNPMVTGTSVLGVK
FDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEE
LLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAP
SLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEK
GVEIEGPLSAQTNWDIAHMISGFE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgttttgggagtcacgggctggccactgggctgggggtccggctccggggcag
ttttaccgcatcccgtccacccccagcggcctcatggacccggcgtccgcgccctgcgag
gggcccatcactcggacccagaaccccatggtgactgggacatcggtactcggggtgaag
ttcgacggcggagtggtgattgctgcagacatgctgggctcctacggctccctggctcgt
ttccgcaatatctctcgtattatgcgggtcaacgacagcactatgctgggtgcgtcggga
gactacgcggatttccagtatttgaaacaagttctcggccagatggtgattgatgaagag
ctgttgggagatggacacagctatagccccagagctattcattcatggttgacaagagcc
atgtacagccgccgctccaaaatgaaccccctgtggaacaccatggtcattggaggctat
gctgatggagaaagctttctcggttatgtggacatgcttggtgtagcttatgaagcccct
tcgctggccactggttatggtgcatacttggctcagcctctgcttcgagaagttctagag
aagcagccagtgctgagtcagactgaggcccgggagcttgtggagcgctgcatgagagtg
ctgtactaccgagatgcccgttcgtataaccggtttcaaattgccactgtaacagaaaag
ggtgttgagatagaaggaccactgtcagcacagaccaactgggacattgctcacatgatc
agtggctttgaatga
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integrated database retrieval system