Mus pahari (shrew mouse): 110320271
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Entry
110320271 CDS
T05929
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110320271 (Exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110320271 (Exosc9)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110320271 (Exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110320271
NCBI-ProteinID:
XP_021051837
Ensembl:
MGP_PahariEiJ_G0026379
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All DBs
Position
4:30973140..30983927
Genome browser
AA seq
435 aa
AA seq
DB search
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCIVAGEKVWQIRVDLHLLNHDGNIIDAAGIAAIVALCHFRRPDVSVQGEEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGV
MLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIANQRITAFKMEK
APIDTSNIEEKAEEIIAEAEPPPEVVSQPVLWTPGTAQIGDGIENWGDLEDSEKEEEEEG
GIDEAVILDDTKMDTGEVSDIGSQGAPIVLSDSEEEEMIILEPEKNPKKIRAQTSADQKA
PGKGQGKRRKKRPAH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacaccgctctccaactgtgagcgccgcttcctgctccgcgcaattgaggag
aagaagcggctggatggcagacaaacctatgattacaggaacatcaggatctcattcgga
acggattatggatgctgtattgtagaactgggaaaaacaagagtccttggacaggtctcc
tgtgaacttgtttctccgaaactcaatcgggccacagaaggcatcctcttttttaacctt
gagctttctcagatggctgctccagcttttgaacctggcaggcagtcggatctcttggtg
aagctgaaccgactcttagaaaggtgcctgcgaaactcaaagtgcatagacaccgagtct
ctctgcatcgtcgctggtgaaaaggtttggcagatccgtgtagacctacatttattaaat
catgatgggaatattattgatgctgctggcattgccgcaattgtagccttgtgtcacttc
cgaagacctgatgtctctgtccaaggagaggaagtaacactgtatacccctgaagagcgt
gatcccgtgccattgagcatccaccatatgcccatttgtgtcagttttgctttctttcag
caaggaacatatttactggtggaccccaatgaacgtgaagaacgcgtaatggatggcttg
ctggtgattgccatgaataagcatcgagagatttgtactattcagtctagcggtggggta
atgctgctcaaagaccaggttttcagatgcagtaaaatagctggtgtgaaagtagcagaa
atcacagagctaatacagaaagctttggaaaatgaccagagagtcaggaaagaaggtgga
aaatttggctttgcagagtctatagcaaatcaaagaatcacagcatttaaaatggagaag
gcccctattgatacctccaacatagaggagaaagcagaagaaattattgctgaagccgaa
cctcctccagaagttgtttctcaacctgtgctgtggactcctggaactgcccagattgga
gacggaatagaaaactggggtgaccttgaagattctgagaaggaagaggaggaggaaggt
ggcattgatgaagctgtcattcttgatgatacaaagatggacactggagaagtttctgat
attgggagccaaggtgcccctatagtgctatcagatagtgaagaagaagaaatgatcatt
ttggagccagagaagaacccaaagaaaataagagctcagaccagtgcagaccagaaggca
ccaggtaaaggccaagggaaaaggaggaagaagagacccgctcactaa
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