KEGG   Mus pahari (shrew mouse): 110320271
Entry
110320271         CDS       T05929                                 
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
  KO
K03678  exosome complex component RRP45
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110320271 (Exosc9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110320271 (Exosc9)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110320271 (Exosc9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 110320271
NCBI-ProteinID: XP_021051837
Ensembl: MGP_PahariEiJ_G0026379
LinkDB
Position
4:30973140..30983927
AA seq 435 aa
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCIVAGEKVWQIRVDLHLLNHDGNIIDAAGIAAIVALCHFRRPDVSVQGEEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGV
MLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIANQRITAFKMEK
APIDTSNIEEKAEEIIAEAEPPPEVVSQPVLWTPGTAQIGDGIENWGDLEDSEKEEEEEG
GIDEAVILDDTKMDTGEVSDIGSQGAPIVLSDSEEEEMIILEPEKNPKKIRAQTSADQKA
PGKGQGKRRKKRPAH
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaaggaaacaccgctctccaactgtgagcgccgcttcctgctccgcgcaattgaggag
aagaagcggctggatggcagacaaacctatgattacaggaacatcaggatctcattcgga
acggattatggatgctgtattgtagaactgggaaaaacaagagtccttggacaggtctcc
tgtgaacttgtttctccgaaactcaatcgggccacagaaggcatcctcttttttaacctt
gagctttctcagatggctgctccagcttttgaacctggcaggcagtcggatctcttggtg
aagctgaaccgactcttagaaaggtgcctgcgaaactcaaagtgcatagacaccgagtct
ctctgcatcgtcgctggtgaaaaggtttggcagatccgtgtagacctacatttattaaat
catgatgggaatattattgatgctgctggcattgccgcaattgtagccttgtgtcacttc
cgaagacctgatgtctctgtccaaggagaggaagtaacactgtatacccctgaagagcgt
gatcccgtgccattgagcatccaccatatgcccatttgtgtcagttttgctttctttcag
caaggaacatatttactggtggaccccaatgaacgtgaagaacgcgtaatggatggcttg
ctggtgattgccatgaataagcatcgagagatttgtactattcagtctagcggtggggta
atgctgctcaaagaccaggttttcagatgcagtaaaatagctggtgtgaaagtagcagaa
atcacagagctaatacagaaagctttggaaaatgaccagagagtcaggaaagaaggtgga
aaatttggctttgcagagtctatagcaaatcaaagaatcacagcatttaaaatggagaag
gcccctattgatacctccaacatagaggagaaagcagaagaaattattgctgaagccgaa
cctcctccagaagttgtttctcaacctgtgctgtggactcctggaactgcccagattgga
gacggaatagaaaactggggtgaccttgaagattctgagaaggaagaggaggaggaaggt
ggcattgatgaagctgtcattcttgatgatacaaagatggacactggagaagtttctgat
attgggagccaaggtgcccctatagtgctatcagatagtgaagaagaagaaatgatcatt
ttggagccagagaagaacccaaagaaaataagagctcagaccagtgcagaccagaaggca
ccaggtaaaggccaagggaaaaggaggaagaagagacccgctcactaa

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