Mus pahari (shrew mouse): 110320395
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Entry
110320395 CDS
T05929
Symbol
Bcan
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mpah00535
]
110320395 (Bcan)
00536 Glycosaminoglycan binding proteins [BR:
mpah00536
]
110320395 (Bcan)
04091 Lectins [BR:
mpah04091
]
110320395 (Bcan)
Proteoglycans [BR:
mpah00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
110320395 (Bcan)
Glycosaminoglycan binding proteins [BR:
mpah00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
110320395 (Bcan)
Lectins [BR:
mpah04091
]
C-Type lectins
Lecticans
110320395 (Bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
hEGF
EGF_2
EGF_3
I-set
Izumo-Ig
Ig_2
ig
Ig_3
EGF_CA
Motif
Other DBs
NCBI-GeneID:
110320395
NCBI-ProteinID:
XP_021052039
Ensembl:
MGP_PahariEiJ_G0026593
LinkDB
All DBs
Position
4:complement(78522598..78535462)
Genome browser
AA seq
883 aa
AA seq
DB search
MIPMLLSLLAALVLTQAPAALADDPKEDSSEDRAFRVRIGATQLRGVLGGALAIPCHVHH
LRPPHSRRAAPGFPRVKWTFLSGDREVEVLVARGLRVKVNEAYRFRVALPAYPASLTDVS
LVLSELRPNDSGVYRCEVQHGIDDGSDTVEVKVKGVVFLYREGSARYAFSFAGAQEACAR
IGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACSGDMDGYPGVRNYGVVG
PDDLYDVYCYAEDLNGELFLGAPPSKLTWEEARDYCLERGAQIASTGQLYAAWNAGLDRC
SPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSA
FSEASSPASDGLEAIVTVTEKLEELQLPQEAMESESRGAIYSIPITEDGGGGSSTPEDPA
EAPRTPLESETQSIAPPTESSEEEGGTLEEEERFKGSQALEEEKEQEDPWVWPRELSSPL
PTGSEAEHSLSQVSPPVQAVLQLGASPSPGPPRVHGPPAETLLPSREGSLTSTPGGAREV
GGETGSPELSGVPRESEEAGSSSLEDGPSLLPATWAPVGPRELETPTEEKSGRTVLTGTA
VQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVG
LHFCSPGWEAFQGACYKHFSTRRSWEEAESQCRALGAHLTSICTPEEQDFVNDRYREYQW
IGLNDRTIEGDFLWSDGAPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHL
SYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDTVLRYRCRDGLAQRNLPLIRCQENGLW
EAPQISCVPRRPGRALRSMDAPEGPRGQLSRHRKAPLTPPSSL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaatgcttctgtccctgctggcggctctggtcctgacccaagcccctgcagcc
ctcgctgatgacccaaaagaagacagctcagaggatcgagccttccgcgtgcgcatcggt
gccacgcagctgcggggcgtgttgggcggtgccctggccatcccatgccacgtccaccac
ctgcggccgccgcacagtcgccgggccgcgccgggcttcccccgggtcaagtggaccttc
ctgtccggggaccgggaggtagaggtgctggtggctcgtgggctgcgcgtcaaggtaaac
gaagcctaccggttccgcgtggctctgcctgcctaccccgcatcgctcacggatgtgtct
ctagtattgagcgaactgcggcccaatgattccggggtctatcgctgcgaggtccagcac
ggtatcgacgacggcagcgatactgtggaggtcaaggtcaaaggggtcgtcttcctctac
agagagggctctgcgcgctatgctttctcctttgctggagcccaggaagcctgcgctcgc
ataggagcccgaatcgccaccccggagcaactctatgcagcctacctaggcggctatgag
cagtgtgatgcaggctggctgtccgaccaaactgtgaggtaccccatccagaacccacga
gaggcctgctctggagacatggatggctaccctggagtgcggaactacggagtagtgggc
cctgatgatctctacgatgtctattgctatgccgaagacctaaatggagaactgttccta
ggcgcccctcccagcaagctgacgtgggaggaggctcgggactactgtctggaacgcggt
gcacagatcgctagcacaggccagctgtacgcagcctggaatgctggcctggacagatgt
agccctggctggctggctgatggcagcgtgcgctaccccatcatcacacccagccaacgc
tgtgggggcggcctgccaggagtcaagaccctcttcctctttcccaaccagactggcttc
cccagcaagcagaaccgtttcaatgtctactgcttccgagactctgcccatccctctgct
ttctctgaggcctccagcccagcctcagatggacttgaggccattgtcacagtgacagaa
aagctggaggaactgcagctgcctcaggaagctatggagagtgagtctcgtggggcgatc
tactccatccccatcacagaagatgggggaggaggaagctccaccccagaagacccagcg
gaggcccccaggacccctctagaatcggaaacccaatccattgcaccacctaccgagtcc
tcagaagaggaaggcggaaccctggaggaagaagaaagattcaaaggctcgcaggctctg
gaggaagagaaagagcaggaggacccgtgggtgtggcccagagagctcagcagccctctc
cctactggctcggaagcagagcattcactctctcaggtgtccccaccagtccaggcagtt
ctacagctcggtgcctcaccttctcccgggcctccaagggtccatggaccgcctgcagag
actttgctcccctcgagagagggaagcctcacatccactcctggtggggcaagagaagta
gggggggaaaccgggagccctgagctctctggggttcctcgagagagcgaggaggcaggg
agctccagcttggaggatggcccttccctacttccagctacatgggcccctgtgggtccc
agagagctggagacccccacagaagagaagtctggaagaactgtcctgacaggcaccgca
gtgcaggcccagccagtgctgcccaccgacagtgccagccgcggtggagtggctgtggct
ccctcatcaggtgactgtatccccagcccctgccacaatggtgggacatgcttggaggag
aaggagggtttccgctgcctatgtttgccaggctatgggggggacctgtgcgatgttggc
cttcacttctgcagccctggctgggaggccttccagggagcctgctacaagcacttttcc
acacgaaggagttgggaggaggcggaaagtcagtgcagagcgctaggtgctcatctgacc
agcatctgcacccctgaggaacaagactttgtcaacgatcgatatcgggaataccagtgg
attgggctcaatgacaggaccatcgagggtgacttcttgtggtcagatggtgcccctctg
ctctatgaaaactggaaccccgggcagcctgacagctacttcctgtctggggagaactgt
gtggtcatggtgtggcatgaccagggacagtggagtgatgtgccctgcaactaccaccta
tcctacacctgcaagatggggcttgtgtcctgtgggcctccaccacagctacccctggct
caaatatttggtcgccctcggctgcgctacgcggtggacactgtgcttcgatatcggtgc
cgagacgggctggctcagcgtaacctgccgttgatccgctgccaggagaatgggctttgg
gaggcccctcagatttcctgtgtaccccgaaggcctggccgtgctctgcgctcaatggac
gctccagaaggaccacggggacagctctcgaggcacaggaaggcaccgttgacacctccc
tccagtctctag
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