Mus pahari (shrew mouse): 110320429
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Entry
110320429 CDS
T05929
Symbol
Cgn
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110320429 (Cgn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
DUF1664
ADIP
GAPES1
Motif
Other DBs
NCBI-GeneID:
110320429
NCBI-ProteinID:
XP_021052113
Ensembl:
MGP_PahariEiJ_G0026760
LinkDB
All DBs
Position
4:complement(84970926..84997304)
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AA seq
1193 aa
AA seq
DB search
MMADPRGPVDHGVQIRFITEPEGATEMGTLRRSGRRPARDARASTYGVAVRVQGIAGQPF
VVLNSGEKGTDSFGVQIKGGNNRGSPGALSSDSELPENPYSQVKGHPATSRSSTSDEEPK
DHSNGKLLRSQSQASLTGLSLMSPSNRSTSLLELAPKQTSSINTIDTAPLSSVDSLINKF
DNQKGGQVRGRTGRRTRTLPHEQRKRSQSLDSRLPRDTREEREQHQSANHWTRGTKYDNH
VDSSKNPSQKQSPLSSFSRSRQTQDWVLQSFEETRDPAMVQFKSTPDLLRDQRETAPPDS
ADHVKATIYGILREGSAESEASVRRKVSLVLEQMQPLGMVSPASTKALAGQAELTRKMEE
LQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEAQQSTKELQNMKLL
LGQEEGLRHGLEAQVKELQLKLKHNQNPDSGKESLLKDLLDTRELLEELLEGKQRVEEQL
RLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKM
SSLVRELQRELEETSEETGHWQNMFQKNKEELRAAKQELLQLRMEKEEMEEELGEKMEVL
QRDLEQARASSRDTHQVEELKKELRRTQGELKELQAEQQSQEVTGRHRNQLLEKQLAALR
AEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQE
ENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAQEEEGN
LAAAKRALEVRLDEAQRGLARLGQEQQALNQALEEEGKQREALRRSKAELEEQKRLLNRT
VDRLNKELEQIGNDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSR
LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAESKKRSQDDKARQLKSLEEK
VSRLEAELDEEKNTVELLTDRVNRGRDQMDQLRTELMQERSARQDLECDKISLERQNKDL
KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQID
DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK
SLEKDAWRKASRSAAESALKQEGLSSDEEFDSVYDPSSIASLLTESNLQTSSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatccccggggcccggtagaccatggagtccaaattcgatttattacagag
ccagagggtgctactgagatgggcacccttcgtcgtagtgggcggcgccctgctagggat
gcaagagccagtacttatggggtcgctgtgcgtgtgcagggcatcgccgggcaacccttt
gtggttcttaacagtggagagaaagggactgactcctttggggtccaaatcaaagggggc
aacaaccgggggtccccaggtgcactgagctccgattcagagctccccgaaaacccctac
tctcaagtcaaggggcacccagccacttctcggagcagcacatctgatgaggagcccaag
gaccactcgaatggaaaactgctccgttcccagtcgcaagcctctctgaccgggctttcc
cttatgagccctagtaataggagcaccagcttgctggaactagcccctaaacagacttcc
tcgattaacaccattgacaccgcccccttgtcttcagtggactcgctcatcaacaagttt
gataatcagaagggtggccaggtccggggccgcactgggcgccgcacaaggacacttccc
cacgaacagcgcaagcggagccagagtctggacagcaggctcccacgggatacacgtgag
gaacgggagcagcaccagtcagccaaccactggacccgcggcacaaagtatgacaaccat
gtggacagttcaaagaacccatcgcagaagcagagcccgctcagcagcttcagccgttcc
cgtcagactcaagactgggtgcttcagagttttgaggagacgcgggatcccgccatggtg
cagttcaaatcaactccagaccttctcagagaccagcgggagacagcaccaccagacagt
gcggaccatgtgaaggctaccatctatggcatcctgagggagggaagtgcggagagtgag
gcgtctgtgaggaggaaagttagtttggtgctggagcagatgcagccgctggggatggtt
tctcctgcttctaccaaggccctggcagggcaggctgagcttacccgaaaaatggaggag
cttcagaagaagctggatgaagaggtgaagaagcggcagaagctagaaccatccagggtt
gggctggagaggcagctggaggagaaggctgaggagtgccaccgactgcaggagttgctg
gagaggagaaagggggaggcccagcagagcaccaaggagcttcagaacatgaagctcctg
ctgggccaggaggaaggactacggcacgggctggaggcgcaggtgaaggaactacagctc
aagctcaagcacaaccagaacccggactctggaaaggagagtctcctcaaggacttgtta
gacacccgggaacttctagaagagctcttagagggcaaacaacgagtagaggagcagctg
aggctgagggaacgagagctgacagctctgaagggggccctgaaagaggaggtggcctcc
cacgaccaggaggtggagcatgtccggctgcagtaccagcgagacacggagcagcttcgc
cgaagcatgcaagatgcgacccaggaccatgctgcactagaggctgagaggcagaagatg
tcttccctcgtgcgggagctgcagagagagctagaggagacctctgaggagacagggcat
tggcagaacatgttccagaagaacaaggaggagctgagagccgccaagcaggaactgctg
cagctgcggatggagaaggaggagatggaagaggaacttggggagaagatggaggtctta
cagagggacttagagcaggcccgagccagttcaagagatactcaccaggttgaggagctc
aaaaaggagcttcgacgcacccagggggagcttaaagagcttcaggcagagcagcagagt
caggaggtgactgggcgacaccggaaccagttgttagagaagcagctggcagcgctgagg
gcagaggctgatcgaggccgagaactggagcagcagaacctccagctacaaaagaccctg
cagcaactgcggcaggactgtgaagaggcttccaaggctaaggtggcatcagagacagag
gccatggtgctggggcagcgtcgggcaaccgtggaaaccacacttcgggagacacaagag
gaaaatgacgaattccgaaggcgcatcctgggtctggagcagcagttgaaggaggcccga
ggtctggcggaaggtggggaagcggtggaggcacggcttcgggacaaagtgcacaggctg
gaggtagagaaacagcagctggaagaggctttgaatgctgcccaggaggaggaggggaac
ctggcagcagccaagcgggctctggaggtccggctagatgaggcccagcgggggctggca
cgcctggggcaggaacagcaagcactgaaccaggccctagaggaagaggggaagcagcgg
gaggctctccgaaggagcaaggcagagctggaggagcagaagcgtttgctgaacaggact
gtagaccgactcaacaaagagctggagcagattgggaatgactccaagctagccctgcag
cagctccaggctcagatggaagattacaaggaaaaggcccggaaggaagtagccgatgcc
cagcgtcaggccaaggattgggccagtgaggctgaaaagaattcaggggggttgagccgg
cttcaagatgagctgcaaaggcttcggcaagccctgcagacatcccaggccgagcgggac
acagccaggctggacaaagaactgctggcccagcgactgcaggggctagagcaagaagcc
gagagcaagaaacgctcccaggatgacaaggctcgacagctgaagagcctagaggagaaa
gtctcacggctggaagcggagttagatgaagaaaagaacaccgtggaactgttaacagat
cgggtgaaccgtggccgggaccagatggatcaactgaggacagagctcatgcaggagaga
tccgctcgacaggacttggagtgtgacaaaatctccttggagagacagaacaaggatttg
aagacccggttggccagttcagaaggcttccagaaacccagcgctagcctctcccagctt
gagtcccagaatcagctgctgcaagagcggctgcaagctgaagagagagagaagacagtt
ctgcagtccaccaatcgaaaactagaacggagggttaaggagctctccatccagattgat
gatgaacggcagcatgtcaacgaccagaaggaccagctaaccctgagggtgaaggctttg
aagaggcaggtggatgaagcggaagaggaaattgagcggctggacagcctgaggaagaag
gcacagcgggaactggaggaacagcatgaggtcaatgagcagctccaagcccggatcaaa
tccttggaaaaggacgcctggcggaaagcttcccgctcagctgctgagtcagctctcaaa
caagaggggctgagctctgatgaggagtttgacagtgtctacgacccctcatccattgca
tcactgcttacagagagcaacctgcagactagctcatgttag
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integrated database retrieval system
