Mus pahari (shrew mouse): 110320446
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Entry
110320446 CDS
T05929
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110320446 (Prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110320446 (Prpf38b)
Spliceosome [BR:
mpah03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110320446 (Prpf38b)
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Paralog
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Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
110320446
NCBI-ProteinID:
XP_021052135
Ensembl:
MGP_PahariEiJ_G0026988
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All DBs
Position
4:complement(98530841..98539802)
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AA seq
544 aa
AA seq
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MANNSPALTGNSQPQHQAAAAVTQQQQQCGGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRK
IKKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREK
ERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKE
NERGRRRDRDYDKERGNDRERDRERSRERSKEQRSRGEGEEKKHKEDKEDRRHRDDKKES
KKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKSSKHKNESKEKSNKRSRSGSQGRTGS
VEKRKREHSPSREKSRKRSRSQDRPHKREHGDSKDQSDRQDHQSSQSGEPESQEKEHKNK
DETV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgaccggcaactcgcaaccgcagcaccaggcggccgcg
gccgtgacccagcagcagcagcagtgcggcggcggcggcggcgccaccaagccggcggtg
tcgggcaagcagggcaatgtgctgccgctgtggggcaacgagaagaccatgaacctcaac
cccatgatcctcaccaacatcctgtcgtcgccttacttcaaagtgcagctctacgagctc
aagacctaccacgaggtggtggacgagatctactttaaggttacgcatgttgagccgtgg
gaaaaggggagcaggaaaacggccggccagacggggatgtgcggaggggttcgaggtgtt
ggaacaggaggcattgtttctacagcattttgccttctatacaaattatttaccctgaag
ttaactcggaagcaagtgatgggtctcataacacatacagactctccatatatcagagcc
cttggatttatgtatataaggtatacccaaccccctacagacctgtgggactggtttgag
tccttccttgatgatgaggaggacctagatgtcaaagctggtggaggctgtgtaatgacc
attggagagatgcttcgttcttttctcacaaaactggagtggttttctactttgtttcca
agaattccagttccagttcagaaaaatattgatcagcagattaaaactcgacctaggaaa
atcaagaaagacggaaaggaaggtgttgaggagatagacagacatgttgagagacggcga
tccagatctccaagaagatcactgagcccacggaggtctccgagaagatcgagaagcaga
agtcatcaccgggagggccatggatcttctagttttgacagagaattggagagagagaaa
gaacgccaacgactagagcgtgaggccaaagagagagagaaagaaaggcgaagatcccga
agcatcgatcggggattagatcgcaggcgaagccgcagtcgggagaggcacagaagtcgc
agtcgcagtcgtgataggaaaggggatagaagagacagggatcgggaaagagagaaagaa
aatgagagaggtcgaagacgggaccgagattatgacaaggagagaggcaatgaccgagaa
agggacagggagagatcaagagagcgctccaaggagcagagaagtaggggtgagggagaa
gagaagaagcacaaagaagacaaggaggatagacgacacagagatgacaaaaaagagtcc
aagaaaaaacacagcagaagtagaagcagagagaggaaacacagaagtaggagcagaagc
agaaacgcagggaagcggagcaggagcaggagcaaggacaagtcaagcaaacataaaaac
gaaagcaaggagaagtcaaataaaagaagcagaagtggcagtcaaggaagaactggcagt
gttgagaagagaaaacgagaacacagccctagcagagagaagtctagaaagcgcagcagg
agccaagaccgtccccacaagagagaacatggcgatagcaaggaccagtcagacagacag
gatcaccagagcagccagagcggagagccggagagccaagaaaaagaacataaaaacaaa
gatgagactgtgtga
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