KEGG   Mus pahari (shrew mouse): 110320446
Entry
110320446         CDS       T05929                                 
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110320446 (Prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpah03041]
    110320446 (Prpf38b)
Spliceosome [BR:mpah03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    110320446 (Prpf38b)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 110320446
NCBI-ProteinID: XP_021052135
Ensembl: MGP_PahariEiJ_G0026988
LinkDB
Position
4:complement(98530841..98539802)
AA seq 544 aa
MANNSPALTGNSQPQHQAAAAVTQQQQQCGGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
SFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRK
IKKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREK
ERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKE
NERGRRRDRDYDKERGNDRERDRERSRERSKEQRSRGEGEEKKHKEDKEDRRHRDDKKES
KKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKSSKHKNESKEKSNKRSRSGSQGRTGS
VEKRKREHSPSREKSRKRSRSQDRPHKREHGDSKDQSDRQDHQSSQSGEPESQEKEHKNK
DETV
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctaacaacagccccgcgctgaccggcaactcgcaaccgcagcaccaggcggccgcg
gccgtgacccagcagcagcagcagtgcggcggcggcggcggcgccaccaagccggcggtg
tcgggcaagcagggcaatgtgctgccgctgtggggcaacgagaagaccatgaacctcaac
cccatgatcctcaccaacatcctgtcgtcgccttacttcaaagtgcagctctacgagctc
aagacctaccacgaggtggtggacgagatctactttaaggttacgcatgttgagccgtgg
gaaaaggggagcaggaaaacggccggccagacggggatgtgcggaggggttcgaggtgtt
ggaacaggaggcattgtttctacagcattttgccttctatacaaattatttaccctgaag
ttaactcggaagcaagtgatgggtctcataacacatacagactctccatatatcagagcc
cttggatttatgtatataaggtatacccaaccccctacagacctgtgggactggtttgag
tccttccttgatgatgaggaggacctagatgtcaaagctggtggaggctgtgtaatgacc
attggagagatgcttcgttcttttctcacaaaactggagtggttttctactttgtttcca
agaattccagttccagttcagaaaaatattgatcagcagattaaaactcgacctaggaaa
atcaagaaagacggaaaggaaggtgttgaggagatagacagacatgttgagagacggcga
tccagatctccaagaagatcactgagcccacggaggtctccgagaagatcgagaagcaga
agtcatcaccgggagggccatggatcttctagttttgacagagaattggagagagagaaa
gaacgccaacgactagagcgtgaggccaaagagagagagaaagaaaggcgaagatcccga
agcatcgatcggggattagatcgcaggcgaagccgcagtcgggagaggcacagaagtcgc
agtcgcagtcgtgataggaaaggggatagaagagacagggatcgggaaagagagaaagaa
aatgagagaggtcgaagacgggaccgagattatgacaaggagagaggcaatgaccgagaa
agggacagggagagatcaagagagcgctccaaggagcagagaagtaggggtgagggagaa
gagaagaagcacaaagaagacaaggaggatagacgacacagagatgacaaaaaagagtcc
aagaaaaaacacagcagaagtagaagcagagagaggaaacacagaagtaggagcagaagc
agaaacgcagggaagcggagcaggagcaggagcaaggacaagtcaagcaaacataaaaac
gaaagcaaggagaagtcaaataaaagaagcagaagtggcagtcaaggaagaactggcagt
gttgagaagagaaaacgagaacacagccctagcagagagaagtctagaaagcgcagcagg
agccaagaccgtccccacaagagagaacatggcgatagcaaggaccagtcagacagacag
gatcaccagagcagccagagcggagagccggagagccaagaaaaagaacataaaaacaaa
gatgagactgtgtga

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