Mus pahari (shrew mouse): 110320461
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Entry
110320461 CDS
T05929
Symbol
Pabpc4l
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03015
mRNA surveillance pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110320461 (Pabpc4l)
09123 Folding, sorting and degradation
03018 RNA degradation
110320461 (Pabpc4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110320461 (Pabpc4l)
03041 Spliceosome [BR:
mpah03041
]
110320461 (Pabpc4l)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110320461 (Pabpc4l)
mRNA cycle factors
Stress granule specific factors
110320461 (Pabpc4l)
Spliceosome [BR:
mpah03041
]
Complex C
Other components
Complex C specific factors
110320461 (Pabpc4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
RRM_7
RRM_occluded
MARF1_RRM1
Nup35_RRM_2
RRM_3
Ham1p_like
CecR_C
RB_A
Motif
Other DBs
NCBI-GeneID:
110320461
NCBI-ProteinID:
XP_021052151
Ensembl:
MGP_PahariEiJ_G0026409
LinkDB
All DBs
Position
4:complement(39985582..39987460)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLEAKYRAASLYVGDLHEDVTEDMLFRKFSTVGQVLSIRICRDLISHRSLGYAYVNFLQ
VNDAQKALDTMNFDVIKGKSIRLMWSQRDACLRRSGIGNVFIKNLDKSIDNKTLYEHFSP
FGTIMSSKVMTDGEGSKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREA
ELRDKPTEFTNVYIKNFGDDIDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSH
EAAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNL
DDTIDDETLRKEFSVFGSICRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSK
PLNIALGQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggaagctaagtaccgtgcagcttccctctacgtgggtgacctccacgaagat
gtcacggaggacatgctgttcaggaaattcagcacagtggggcaggtgttgtccatccga
atctgcagggacctcatttcccatcgttcactaggctacgcctatgtcaattttctccag
gttaatgatgcccagaaggccttagacaccatgaactttgacgtgatcaaaggtaaatcc
atccgtctcatgtggtctcaacgggatgcttgcctgaggagatcgggaatcgggaatgtg
tttatcaagaatctggacaaatccattgataacaaaaccttgtatgaacacttctcacct
tttggaacgatcatgtcttccaaggtgatgactgatggagaaggctccaagggatatggc
ttcgtgcactaccaggaccggagagcagcagacagggccattgaggagatgaatgggaag
ctgctgagggagagcactttgttcgtagccagattcaaaagccgtaaggatcgggaggct
gagctcagagacaaaccaactgaattcactaatgtgtatatcaaaaactttggagatgac
atagacgatgagaagctcagggaagttttcagcaaatatggccaaactttgagtgttaag
gtgatgaaagatgccactgggaagtccaaaggctttggatttgtgagttttgatagccac
gaggctgcgaaaaacgcagttgaagacatgaatggacaggacataaatgggcagacgatt
tttgtaggcagagcccagaagaaggtagaacgacaggctgagttaaaggaaatgtttgag
cagatgaaaaaggaaagaatccgtgcacgccaggcagctaagctctacattaagaacctg
gatgacaccatcgatgatgaaacactgcgcaaggaattttcagtctttgggtccatttgc
agggttaaagtgatgcaggaagcagggcagagcaaaggctttggcttgatctgctttttc
tccccggaggcagcagctaaagcaatggctgagatgaatggccgcatccttggctccaaa
cccctcaacattgcactgggtcagaagcactga
DBGET
integrated database retrieval system
