Mus pahari (shrew mouse): 110320750
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Entry
110320750 CDS
T05929
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110320750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110320750
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110320750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
ACT_13
AAA_21
SMC_N
AAA_23
SRP54
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-GeneID:
110320750
NCBI-ProteinID:
XP_021052558
Ensembl:
MGP_PahariEiJ_G0013604
LinkDB
All DBs
Position
1:89854909..89977847
Genome browser
AA seq
1683 aa
AA seq
DB search
MDSLQMRQFSVLLWKNFLLKSRKVVGLVVEIILIFLLFVWTLTVRRISKKTFINDVIFKP
ILLTLPEFLNENFDYELAYVPSESDAARNITEMVKKDLNFNFKVQGFPSEESFEKYIKYE
NKAAHVLAAIVFDHKFKTSNERLPLQVKYSLRFGRIYNPENVSKPSEDQKEVEWNTSTLF
PSVPSLGPRNFFENDGGDPGYIREGFLIVQHSVDKAIMMYHSGRAAEVMFANTTIYAERF
PHPAFIHDTFLWTFIAMLPWTILFTFTQMALVIVGTIMLEKEKRLKEYQLMVGLSNAMLW
VSYFITFLVMYFIIICLLCGILFLKITHERVFQHSDPFFIAFYFTCFAVSSMLLGFLIST
LFNKASLATSIAGFLHFLTFFPYLIFYHKYDQTGLSGKLALCLITNTALAFGTDLICKLE
MKGHGAQWYNFATKVNVDDDLTLAHIIGMFLFSAFLYGLVAWYLDAVFPGKYGVPKPWNF
FLQKAYWFGEPALSREESQVSGLLPSDFMEPEPVGLVAGIRIQHLYKEFILKNSTLMAVN
DLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVYISGYDISSDMVQIRKSLGL
CPQDDLLFPMLTVSEHLHFYCVIKGIPLQNRSRETHRMLTSFGLLQQSNTMSKDLSGGMK
RKLSIIIALIGGTKVVILDEPTSGMDPVSRRATWDLLQHYKKDRTILLTTHHMDEADVLG
DRIAILVMGTLKCCGSSLFLKKLYGVGYHLVIVKTPDSNDEKIFQLIKNYIPTAKMETNV
AAELSFILPKEHTDRFAELFTDLEGKEEELGISGFGVSMTTMDEVFFKVSNLEDLKLNTE
IAPSASIESQSPSEDNQNTNVSRNFERPGYSRRHLDSSFNDGWSLYVQQFRAMFIKRVMF
SWRYWQLLLLQLLALLGLTYLLIKGISFSVPEKPARVMDLEQYGETIVPFSVSGDPNLTQ
ILTKNLEIMLKAKKQKIHKVQGDMKNYLLRNKDCIYSCIVAFSIDVTTEEKTFIFWFNNE
AYHASPLSLSILDNIIYKYLSGPDATITVSNNPQPQRVTKDKSDETSASGIQIVFNLLFG
MSIFTSGFCLMTVTERVSKAKHIQFVSGVYTLNFWLSALLWDLIVHFVACVLLLIVFLYT
DVDILLEKYHFLDTMLILMLFGWSIIPFIYLLSFLYNNSTNAYIKIFVFNHCLGFMSIIV
DAVVQIIPDIKTSTKNLILNSMLLLPIYNFGMSIYKYYNIQEIRKLCSSLGYLNTIPSCK
SQIIDIPIYSMDQKAIGRHVTAMAATGLTYFILIILLETTSWNLMTFIYRYVLFGIYRIF
YKVRMFEELSGYSEEEDVQNERETILNHPQHSLNSTVLIKELIKIYFKIPPTLAVRNVSV
AIQKEECFGLLGLNGAGKTTTFKILTGEEIATSGDVFIEGYSITRNILKIRSKIGYCPQF
DALLDYMTSREILTMYARVWGIPENNIIAYVDNLLKMLYLKPQANKFIYTLSGGNKRRLS
TAIAIMGNSSVVFLDEPSTGMDPLARRMLWNAVIKTRESGKVIIITSHSMEECEALCTRL
AIMVQGKFVCLGSPQHLKNKFGNIYTMTIKFKIDTDDNMVQDLKNFIAKVFPGSDLKQEN
QGILNYYIPSKNNSWGKVFGILEKVKEDYNLEDYSISQITLEQVFLTFANPDNTQSDYEK
AVP
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggattcactacagatgaggcagttttcagtcctcctgtggaaaaatttccttttaaag
agccggaaggtggttggcttagtggtggagatcatcttgatatttctgttgtttgtatgg
actttgactgtacgcagaatttcaaagaagacatttataaatgatgtgattttcaagcct
attctcttgacattacccgaattccttaatgaaaactttgactatgaattggcttatgtg
ccttctgagagtgatgcagcaagaaatattactgagatggtgaaaaaggatttaaatttc
aactttaaagttcaaggctttccttcggaagaatcttttgagaaatacattaagtatgag
aacaaggctgcgcatgtgctggctgctattgtgtttgatcataagttcaaaaccagcaat
gaacgcttgccgcttcaggtaaaatatagtttgcgctttggtcgtatctataatcctgaa
aatgtgtcaaagccatctgaggatcagaaagaagtagagtggaatacatcaacactcttc
ccatccgtgccttctctaggaccccggaacttcttcgaaaatgatgggggagacccagga
tacatcagagaaggatttcttatcgtgcagcattcggtagacaaggccatcatgatgtat
cacagtggcagagcagctgaagtcatgtttgccaacaccacaatttatgcagagagattc
ccacacccagccttcattcacgacaccttcttgtggactttcattgctatgcttccttgg
acaattttatttacatttactcaaatggcacttgtcatagttgggaccattatgttggaa
aaggaaaagagattaaaggaataccagctcatggtgggactcagtaatgctatgctctgg
gtttcctatttcatcaccttcttagtgatgtatttcatcatcatctgtttgctgtgtggg
attttattcctcaagattacacatgagagagtcttccagcacagtgacccgttcttcatt
gccttctatttcacgtgttttgccgtctcctcaatgctgctcggcttcctgattagcaca
ctctttaataaagcctctctggccacttccattgcagggttcctccacttcctcaccttc
tttccgtatttgatcttctatcataagtacgaccagacaggcctcagcgggaagctggct
ctctgtctcattaccaacactgcgctagcatttgggaccgacttgatatgcaagctggaa
atgaaggggcatggcgctcagtggtacaacttcgctacaaaagtaaacgttgatgatgac
ttaaccttggctcacataataggaatgtttttatttagtgcttttctgtatggccttgtg
gcctggtacttagacgctgtctttccagggaagtatggtgtgcccaagccctggaacttt
ttcctgcagaaagcctactggtttggagagccagccttaagcagggaagagagccaagtc
tctggtttacttcccagtgattttatggagcctgaacctgttggcttagtggctggcatc
cggattcagcacttgtacaaggaattcatcttaaaaaacagtactctgatggcagtaaac
gacttgtctttgaacttatatgaggggcagataactgttcttcttggacataacggggca
ggaaaaaccaccacgctgtccatccttacaggcttgtatcttcctaccagaggaaaggtc
tacattagtggatatgacatctcatctgacatggttcaaattagaaaaagcttgggcttg
tgccctcaggatgacctgttgttcccgatgctgacagtgtcagaacaccttcatttctac
tgcgtgatcaaaggaatacctttgcagaaccgatcaagagaaactcacagaatgctcacc
tcttttggcctgctgcagcaaagtaataccatgtcaaaggatctgagcggaggaatgaag
cgcaagctctcaatcattatagctctgatagggggcactaaggtggtgatacttgatgag
ccaacttctggcatggatccagtctccaggagggccacctgggacctacttcagcattat
aaaaaggaccgtaccatcttactgaccacacaccatatggatgaggctgatgtgcttggt
gaccggatcgctatcctggtcatggggaccctgaagtgctgtggctcttcgctttttctg
aagaaactatatggtgtggggtatcacctggtcatcgtgaagactcctgacagcaatgat
gaaaaaatcttccagctgattaagaattacataccgactgccaagatggagaccaatgtt
gcagctgagctgtcatttatcctgcccaaggagcacacagacaggtttgcagagcttttc
acagacctagaaggaaaagaagaagagctgggaatctctggctttggtgtctccatgact
accatggatgaggttttcttcaaggtcagtaatctggaagatctgaaattgaacactgag
attgctccatcagcttccatagagagccaaagcccaagtgaagacaatcagaacacgaat
gtgtccagaaactttgagcgaccaggttactcaagaagacacttggattcttcattcaat
gatgggtggtctctttacgtccagcagttccgagccatgttcatcaaaagggtaatgttt
tcttggcgctactggcaactgctgctgttgcagttgctggcacttctgggtctcacgtat
cttctgataaaaggaataagtttctcagttcctgaaaagcctgccagggtgatggacttg
gagcagtatggcgagaccattgtccctttctcagtttctggggatcccaatttgactcag
attctcaccaaaaatcttgagatcatgttgaaggctaaaaaacaaaaaattcataaagtg
caaggtgatatgaagaactacttgctgagaaataaagactgcatttactcatgcatcgtt
gccttttccattgatgttaccacagaagaaaagacatttatcttttggtttaacaatgag
gcataccatgcatcaccgttatctttatcgatactagacaacattatttataagtatctc
tccggccctgatgccaccattacggtctccaacaaccctcagcctcaacgtgtcaccaaa
gacaaatctgatgaaacaagcgcatcaggaatccagatagtctttaacttgctttttggg
atgagtattttcaccagtggcttttgccttatgacagtgactgagagagttagtaaagca
aagcacatacagtttgtgagcggtgtctatactttgaatttttggctctctgccttgctg
tgggatctcatcgtccacttcgttgcctgtgtcctgctgctgatagtgttcctatacact
gatgtggatatattgttggagaaataccacttcctggacacaatgctcatcctcatgttg
tttggctggtctattatccccttcatctacctgctaagcttcttgtacaacaatagcacc
aatgcctacatcaagatctttgtcttcaaccactgtttagggtttatgagtataattgtg
gatgccgtggtacaaatcataccagatattaaaaccagtactaagaatctcatacttaac
tccatgctgctgttacccatttataactttgggatgagtatctacaaatactataacatc
caggagataaggaaattatgttcttctttgggatatcttaataccattccaagttgcaaa
agtcaaattattgacattcctatatacagtatggatcaaaaagcaatcggaaggcatgtg
actgccatggccgccacaggactgacatactttatcctcattatccttctggagactact
tcatggaatctaatgaccttcatatatcgatatgttctctttggtatctacaggatattt
tataaggttagaatgttcgaggagttatctggatactcggaagaggaagatgtacaaaat
gaaagagagactatcctgaaccatcctcagcactctctgaattctactgtgctcattaaa
gagctcataaagatatattttaaaattccacccactctggctgtgagaaatgtctctgtc
gccattcaaaaggaggagtgctttggattgctgggattaaatggagctgggaaaactact
acttttaaaattctgactggagaagagatagctacctctggggatgtgttcattgaaggc
tacagcatcaccagaaatattttaaagataaggtcaaaaattggctattgtccacagttt
gatgccttgctggattacatgacctctcgagagatattgacaatgtatgccagggtgtgg
gggattccagagaacaatattatagcctatgtggacaacttgttgaaaatgctgtatctg
aaaccacaggctaataagtttatttacactttgagtggaggaaacaaacggaggctgagc
actgcgattgccataatgggaaactcttcagttgtcttcctagatgagccatccactggc
atggacccactagcccggcgcatgctctggaacgcagtgataaagacaagggagagtggc
aaggtcatcatcataacctctcacagtatggaagagtgtgaagctctctgtaccaggcta
gccatcatggtgcagggaaagtttgtgtgcctgggaagccctcagcatctcaagaacaaa
tttggcaatatttacaccatgaccatcaagttcaaaattgacactgatgacaacatggta
caagatttaaaaaattttattgccaaagttttcccaggtagcgacttaaagcaagagaat
caagggatccttaattactacattcccagcaagaacaacagctggggaaaggtgtttggc
attctggagaaagtgaaggaggactacaatttagaagattactccatcagtcagatcacg
ctggagcaagtcttcctgacctttgccaatccagataacacacagagtgattatgagaaa
gcagtgccttga
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integrated database retrieval system
