Mus pahari (shrew mouse): 110320838
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Entry
110320838 CDS
T05929
Symbol
Tchh
Name
(RefSeq) trichohyalin
KO
K18626
trichohyalin
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110320838 (Tchh)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
110320838 (Tchh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S_100
EF-hand_1
EF-hand_8
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
110320838
NCBI-ProteinID:
XP_021052607
LinkDB
All DBs
Position
4:83741160..83746668
Genome browser
AA seq
1452 aa
AA seq
DB search
MSPLIRSIVDITEVFNQYASQSCDGASLSKKDLKNLLERELGDVLQRPHDPETVDLTLEL
LDRDCNGRVDFNEFLLFLFKIAQACYYALDQAAAELGEKRALPREKRNLSQDRRQEDQRR
FEPRGRQLDEEPGRRSWQKRREQEERALEQRHRQHRDEEQRLQRRELQELEERLAEKEPL
SWSKGRDAEEFSEVEELQRQERQELKGRGQTEERRLQKRRQEELREPLLRREQELRREQE
LRREQELRQELRREQELRREQELRQELRREQELNRRQELRREQELRREQELRREQELRQE
LRREQELRQELRREQELRREQELRQELRREQELRREQELRQELRREQELRREQELRQELA
EEDELTRIREADESITQRWQWQLENEAEARQNKVYSRPRRQEQRLRQELEEHQLREQEEQ
RRDLQQQRPAEEASQRNQWERPQRAEERLEQEQRFRDREEQRFREEKLQRAELQDSLLEE
EQRRVQEERREPNRSRQLREESQRRHTLYAKPSQRQRREEELREEQLLQEEQRQQRERKY
RREEDLQQEEERLQQDEEQIQRERRRLQRERQYQEEDLQQEEERLQQEEERLQRERRRLQ
QERQYQEEDLQRLRDEDERRDLKWQWQPRKENEVRSNRLFTKRREDEETTQQLEDPQERE
RRQDRRPLQDEEEEKRELEQERRRRQQRDRQILEEEQFQREHQREAKRRDEKFQEEEQLQ
GESRRQQQEREGKFLEEERQLRTEQEEQRRRQEQEREFQVEEERLQEREKELRQECDRKS
REEQERRQQREEEQLRRQEQDQRFRREQERRLEREEEQLRDRPFRRDQERRLEREEEQLR
DRPFRREQERRLEREEEQLXXXXXXXXXXRRLEREEEQLRDRPFRREQERRLEREEEQLR
DRPFRREQELRRERKFREEEERSEKLEEEQRGQERDRLRVEEQLRGQREEEQRRRQQRDR
TLRREEELRQELEEERLRDRKIRREQELRRDRKFHEEEERRQEEFEEKQPRLQEPDRRFR
REQELRQEREKEQRRGQERDRRSREEQELRQELEEERLRDRKIRQELQEEELRRQERDRK
FREEQELRQELEEERLRDGKIRREQELRREQELSREQELRREREEERLRDRKIRRDQELR
QELEEEQLRRQERDRKIREEQELGQELEEERLRDRKIRREQELRREREQEQRRRLEREEE
QQRLQEREEEQRRRQEREQEQQRRQEREDEQFRFEEQQRRRQEREQQLRQERDRRVLEEE
ELRQEREELLHRQVGGRKFREEERLRLEREEQQRRLQERDNRRFREEVELRQEREEQQLR
QERDRKFREVEELRQEEEQRRRQERDRKFREEKHLREEQQLRREKRDGQYPTEEQFARDT
IRRQEQELRQEEEQRRRQERERKFQEEQIRRRQEEQRRRQILEPGTRQFANVPVRSSPLY
EYIQEQRSQYRS
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacttataagaagcattgttgatatcactgaagttttcaatcaatatgcatca
caaagttgtgatggagcatcacttagcaagaaagacctgaaaaacctccttgagagagaa
cttggagatgtccttcagagaccacatgaccctgagaccgtagacctgaccctagagctt
ctggatcgcgactgcaacgggcgtgttgatttcaacgaattcctcctgttccttttcaag
attgctcaagcttgctattatgctctcgatcaggcggccgcagagctaggcgagaagaga
gccctgcccagggaaaagaggaacctgtcacaagatcgcaggcaagaagaccaaaggaga
ttcgagccccggggtagacaactggacgaagaacctgggcgccgaagctggcagaagaga
cgtgagcaggaggagcgcgctttggagcagcgccaccggcagcaccgcgatgaagagcag
aggttgcaaaggcgagaactgcaagaactggaggaacgccttgcagagaaagagcccctt
agctggagtaagggtcgtgacgcggaggagttttctgaggtagaggaactgcaaaggcaa
gagagacaggaactcaagggcaggggccaaacagaagagagaaggctgcagaagcgcagg
caagaagagctacgcgaacccctgctaaggcgcgagcaggagttgaggcgcgaacaagag
ctaaggcgtgagcaggagttgaggcaggaactgaggcgcgagcaggagctaaggcgcgag
caggagctgaggcaggagctgaggcgcgaacaggagctgaatcgaaggcaagagctgagg
cgcgaacaagagctaaggcgcgagcaggagctgaggcgcgagcaggagctgaggcaggag
ctgaggcgcgagcaggagttgaggcaggaactgaggcgcgagcaagagctaaggcgcgag
caggagctgaggcaggagctgaggcgcgagcaagagctaaggcgcgagcaggagctgagg
caggagctgaggcgcgagcaggagctaaggcgcgagcaagagctgaggcaggagctggct
gaggaggacgaactgacgcggatccgggaagccgacgagagcatcacccagaggtggcag
tggcagctcgaaaacgaggctgaagcccgtcagaacaaggtctactctaggcctaggagg
caggagcagaggcttcgccaggagctggaggagcatcagctccgggagcaggaggagcag
cgccgcgacctccaacagcagcgtcccgctgaggaggcgagccagcgcaaccagtgggag
aggccacagcgggcggaggagcgcctggagcaggagcagcggttccgcgacagggaggag
cagcggttccgggaggagaaactgcaaagagcagagctccaggacagcctcctagaggaa
gaacagaggcgagtccaggaggaacgccgagagccaaacaggagccggcaactgcgggaa
gaaagccagaggcgccacacactgtacgccaaacccagccagaggcagcgaagggaggag
gagctacgcgaggaacagctgttgcaagaagagcagcgccagcagcgggagaggaaatac
cgcagggaggaggatctgcaacaggaggaagagcggctgcagcaagacgaagagcaaata
cagcgagaaaggaggcgcctgcagcgggagaggcagtatcaggaggaggatctgcaacag
gaggaagagcggctgcagcaggaggaagagcggctgcagagagaaaggagacgcctgcag
caggaaaggcagtatcaggaggaggacctgcagcggctgcgggatgaagatgagcgcagg
gatctaaaatggcagtggcaaccaaggaaagaaaatgaagttcgtagtaacaggctcttc
accaaacgcagagaggatgaggaaacgacccagcagctggaagatcctcaggagcgagag
agacgtcaggatcggcggcctctgcaagacgaagaggaagagaagagagagctggagcag
gagaggaggcgtcgacagcagcgcgaccgtcagatcctagaggaagagcagtttcagcga
gagcaccaacgagaagccaaaagacgagatgagaagttccaggaggaagaacagctccag
ggagaatcgagaagacagcaacaggagagagagggcaagttccttgaggaggaaaggcag
ctgcggacagaacaggaagagcagaggcggcgtcaagaacaagagagagaattccaagtg
gaggaggagcgcctccaagaacgcgagaaagaacttcggcaggaatgcgacagaaaatcc
cgtgaagaacaagagcgccgccagcagcgtgaggaagagcagctgaggcgtcaggagcag
gaccagagattccgtcgggaacaagaacgccgcctggagcgtgaggaagagcagctgcgg
gacagaccattccgccgggatcaagaacgccgcctggagcgtgaggaagagcagctgcgg
gacagaccattccgccgggaacaagaacgccgcctggagcgtgaggaagagcagctnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnncgccgcctggagcgtgaggaagagcagctgcgg
gatagaccattccgccgggaacaagagcgccgcctggagcgtgaggaagagcagctgcgg
gacagaccattccgccgggaacaagagctcagacgcgaaagaaaattccgtgaggaagaa
gagcgcagcgagaaactggaggaagagcagcgtggccaagagcgagaccgtttgagggtg
gaggagcagcttcgcggacagcgagaggaagagcagcgccgccgtcagcagcgtgacaga
acgttacgccgggaagaggagctccgccaggaacttgaggaagagcggctgcgggacaga
aagatccgcagggaacaagagctcaggcgcgacagaaaattccacgaggaagaagagcgc
cgccaggaggagtttgaggaaaagcagccgcggcttcaggaacctgacagaagattccgc
cgggaacaagagctccgtcaggaacgcgaaaaagagcagaggagaggccaggaacgtgac
agaaggtcccgcgaggaacaagagctccgccaggaactcgaggaagagcggctgcgggac
agaaagatccgccaggaactccaggaagaggagctaaggcgccaggaacgtgacagaaaa
ttccgtgaggaacaagagctccgccaagaactggaggaagagcggctgagggatggtaag
atccgccgggagcaagagctccgccgggagcaagaactcagccgggagcaagagctccgc
agggagcgcgaggaagagcggctgagggacagaaagatccgccgggaccaagaactccgc
caggaactggaggaagagcagctgaggcgccaggaacgtgacagaaaaatccgtgaggaa
caagagctcggtcaagaactggaggaagagcggctgcgggacagaaagatccgccgggag
caagagctccgccgggagcgcgagcaagagcagcggcggcgcctggagcgtgaggaagag
cagcagcgtctccaggagcgtgaggaagagcagcgccgccgccaggagcgcgagcaagag
cagcagcggcgccaggagcgtgaagacgaacaatttcgctttgaggaacagcagcgccgc
cgtcaggaacgcgagcaacagttgagacaggagcgcgacaggagagtccttgaggaagaa
gagcttcgtcaggaaagggaggagctgctgcaccgccaggtgggtggcaggaaattccgg
gaagaggagcgactccgcctggaaagagaggagcagcagcgtcgtctccaggagcgtgac
aacagaaggttccgcgaggaagtagagctcaggcaagaaagggaagagcagcagctgcgc
caagagcgtgacagaaaattccgtgaggtagaagagcttcgccaggaagaagagcagcgc
cgccgccaggagcgtgacaggaaattccgggaagagaaacacctacgcgaggaacagcag
ttgcgcagggagaagcgagatggtcaatacccgactgaggagcagtttgcccgggatacg
attcgtcgccaggaacaagaactacgtcaagaagaggaacaaagacgtcgccaagagcgg
gagagaaaattccaagaagagcagatccgtcgtaggcaagaggagcagaggcgccgccaa
atcctggagcctggtacgcgccagtttgccaatgtcccagtgcgttccagccctctctat
gagtacatccaggagcagaggtctcaataccgctcttaa
DBGET
integrated database retrieval system