KEGG   Mus pahari (shrew mouse): 110320859
Entry
110320859         CDS       T05929                                 
Symbol
Sort1
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04142  Lysosome
mpah04722  Neurotrophin signaling pathway
mpah04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    110320859 (Sort1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    110320859 (Sort1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    110320859 (Sort1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR TMEM_230_134
Other DBs
NCBI-GeneID: 110320859
NCBI-ProteinID: XP_021052618
Ensembl: MGP_PahariEiJ_G0026973
LinkDB
Position
4:97922835..98003147
AA seq 885 aa
MERPRGAADGLLRWPLGLLLLLQLLPPAAVGQDRLDAPPPPAPPLLRWAGPVGVSWGLRA
AAPGGPVPRAGRWRRGAPAEDQDCGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTG
VILVLTTFQVPLVIVSFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKV
ILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVS
KNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVK
IYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANEDMVF
MHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSED
NSIQSMITFDQGGRWEHLRKPENSKCDATAKNKNECSLHIHASYSISQKLNVPMAPLSEP
NAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLEGPHYYTILDSGGIIVAIEHSNR
PINVIKFSTDEGQCWQSYVFTQEPIYFTGLASEPGARSMNISIWGFTESFITRQWVSYTI
DFKDILERNCEEDDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVAKQ
PSVCPCSLEDFLCDFGYFRPENASECVEQPELKGHELEFCLYGKEEHLTTNGYRKIPGDR
CQGGMSPAREVKDLKRKCTSSVLSPTKQQDSRPQGHSLSQNPASPPLGYTENTHFLSPTQ
KQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQQHAEADGVEALD
TASHAKSGYHDDSDEGLGVFLRQEAMAEWACAVNGMEHRFEVLGE
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggagcggccccggggagctgcggacggccttttgcgctggcccctcggcctcctcctg
ctcctgcagctgctgcctccggccgccgtcggccaagaccggctggacgcgccgccgccg
cccgcgcctcctctgctgcgctgggccggtccggtcggggtgagctgggggctgcgcgcc
gccgcgcccgggggccccgtcccccgcgctggccgttggcgccgcggcgcgcccgccgag
gaccaggattgcggccgcctcccggacttcatcgccaagctgaccaacaatacgcaccag
catgtctttgatgacctcagtggctcagtgtccttgtcctgggttggagacagcactggg
gttattctcgtcctgaccacgttccaagtgcctctggtaattgtgagctttggacagtcc
aagttgtatcgaagtgaggattatggaaagaactttaaggatattacaaatctcatcaat
aacaccttcattcggacggaatttggcatggctattggtcctgagaactctggaaaggtg
atactaacagcagaggtgtctgggggaagccgaggcggaagagtgttcaggtcatcagac
tttgccaagaactttgtgcaaacagatctcccctttcatcctctgacgcagatgatgtac
agcccccagaattctgattatctgttagctctcagcactgaaaatggcctgtgggtatcc
aagaattttggggaaaaatgggaagaaatccacaaagcagtatgtttggccaaatgggga
ccaaacaacatcatcttctttactacccatgtgaatggctcctgcaaagctgatcttggt
gccctggaattatggagaacatccgacttggggaaaaccttcaaaaccattggcgtgaaa
atctactcatttggtcttgggggccgtttcctttttgcctctgtgatggctgataaggac
acaacaagaaggatccatgtgtcaacagaccaaggggacacatggagcatggcacaactt
ccttctgtgggacaggagcagttctactctatcttggcagccaatgaagacatggtcttc
atgcatgtagatgaacctggagataccgggtttggcaccatctttacctctgatgaccga
ggcattgtctactccaagtctctggacagacacctctataccaccacaggcggggagacg
gactttaccaacgtgacgtccctccgtggagtctatataacaagcacgctctcagaagat
aactctattcagagcatgatcacttttgaccagggaggacggtgggagcacctgcggaag
ccggagaacagcaagtgcgatgctaccgcaaagaacaagaatgagtgcagccttcatatc
cacgcttcttatagcatctcccagaagctaaatgttccaatggctccactctctgagccc
aatgccgtgggcatagtcatcgctcatggtagtgtgggagacgccatctcggtgatggtc
ccagacgtgtacatctcagatgatgggggttactcctgggcgaagatgctagaaggaccg
cattactataccatcctggactctggaggcatcatcgtggccattgagcatagcaaccgt
cctatcaatgtgattaagttctccacagatgaaggccagtgctggcagagctatgtgttc
actcaggagcccatctacttcactgggcttgcttccgagcctggagccaggtccatgaac
atcagcatctggggattcacagagtctttcattacccgccagtgggtctcctacacaatc
gatttcaaagacatccttgagcggaactgtgaagaggatgactataccacgtggctggca
cactccacagaccctggagattacaaagatggctgcattttgggctataaagaacagttc
ctacggctacggaagtcatccgtctgtcagaatggtcgagactatgttgtggccaagcag
ccatctgtctgtccgtgttccctggaggacttcctctgtgactttggctacttccgtcca
gagaatgcctcggagtgtgtggagcagccggaactgaagggacatgagttagagttctgt
ctgtatggcaaggaggagcacctgacaacaaatgggtaccggaaaatcccaggagacagg
tgccaaggtgggatgagcccagcccgagaagtaaaagacttgaaaaggaagtgcacaagc
agtgtcctgagccccacgaagcagcaggactcccgcccacagggacacagcttgtcccag
aatccagcttcgcctcctcttggatacactgaaaacacacacttcctatctcctacccag
aagcagaattccaagtcgaattctgtccctattatcctggccatcgtgggactgatgctt
gtcacagtcgtagcaggagtcctcattgtgaagaaatatgtctgtggcggaaggttcctg
gtgcaccgatactctgtgctacagcaacatgcagaggctgacggcgtggaggctttggat
acagcctcccacgcgaaaagtggatatcacgatgattcggacgaggggcttggagttttc
ctgaggcaagaggccatggctgaatgggcctgtgctgtgaatggaatggaacaccgcttt
gaggtccttggagagtga

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