Mus pahari (shrew mouse): 110320859
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Entry
110320859 CDS
T05929
Symbol
Sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04142
Lysosome
mpah04722
Neurotrophin signaling pathway
mpah04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110320859 (Sort1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
110320859 (Sort1)
09156 Nervous system
04722 Neurotrophin signaling pathway
110320859 (Sort1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
110320859
NCBI-ProteinID:
XP_021052618
Ensembl:
MGP_PahariEiJ_G0026973
LinkDB
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Position
4:97922835..98003147
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AA seq
885 aa
AA seq
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MERPRGAADGLLRWPLGLLLLLQLLPPAAVGQDRLDAPPPPAPPLLRWAGPVGVSWGLRA
AAPGGPVPRAGRWRRGAPAEDQDCGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTG
VILVLTTFQVPLVIVSFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKV
ILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVS
KNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVK
IYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANEDMVF
MHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSED
NSIQSMITFDQGGRWEHLRKPENSKCDATAKNKNECSLHIHASYSISQKLNVPMAPLSEP
NAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLEGPHYYTILDSGGIIVAIEHSNR
PINVIKFSTDEGQCWQSYVFTQEPIYFTGLASEPGARSMNISIWGFTESFITRQWVSYTI
DFKDILERNCEEDDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVAKQ
PSVCPCSLEDFLCDFGYFRPENASECVEQPELKGHELEFCLYGKEEHLTTNGYRKIPGDR
CQGGMSPAREVKDLKRKCTSSVLSPTKQQDSRPQGHSLSQNPASPPLGYTENTHFLSPTQ
KQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQQHAEADGVEALD
TASHAKSGYHDDSDEGLGVFLRQEAMAEWACAVNGMEHRFEVLGE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccccggggagctgcggacggccttttgcgctggcccctcggcctcctcctg
ctcctgcagctgctgcctccggccgccgtcggccaagaccggctggacgcgccgccgccg
cccgcgcctcctctgctgcgctgggccggtccggtcggggtgagctgggggctgcgcgcc
gccgcgcccgggggccccgtcccccgcgctggccgttggcgccgcggcgcgcccgccgag
gaccaggattgcggccgcctcccggacttcatcgccaagctgaccaacaatacgcaccag
catgtctttgatgacctcagtggctcagtgtccttgtcctgggttggagacagcactggg
gttattctcgtcctgaccacgttccaagtgcctctggtaattgtgagctttggacagtcc
aagttgtatcgaagtgaggattatggaaagaactttaaggatattacaaatctcatcaat
aacaccttcattcggacggaatttggcatggctattggtcctgagaactctggaaaggtg
atactaacagcagaggtgtctgggggaagccgaggcggaagagtgttcaggtcatcagac
tttgccaagaactttgtgcaaacagatctcccctttcatcctctgacgcagatgatgtac
agcccccagaattctgattatctgttagctctcagcactgaaaatggcctgtgggtatcc
aagaattttggggaaaaatgggaagaaatccacaaagcagtatgtttggccaaatgggga
ccaaacaacatcatcttctttactacccatgtgaatggctcctgcaaagctgatcttggt
gccctggaattatggagaacatccgacttggggaaaaccttcaaaaccattggcgtgaaa
atctactcatttggtcttgggggccgtttcctttttgcctctgtgatggctgataaggac
acaacaagaaggatccatgtgtcaacagaccaaggggacacatggagcatggcacaactt
ccttctgtgggacaggagcagttctactctatcttggcagccaatgaagacatggtcttc
atgcatgtagatgaacctggagataccgggtttggcaccatctttacctctgatgaccga
ggcattgtctactccaagtctctggacagacacctctataccaccacaggcggggagacg
gactttaccaacgtgacgtccctccgtggagtctatataacaagcacgctctcagaagat
aactctattcagagcatgatcacttttgaccagggaggacggtgggagcacctgcggaag
ccggagaacagcaagtgcgatgctaccgcaaagaacaagaatgagtgcagccttcatatc
cacgcttcttatagcatctcccagaagctaaatgttccaatggctccactctctgagccc
aatgccgtgggcatagtcatcgctcatggtagtgtgggagacgccatctcggtgatggtc
ccagacgtgtacatctcagatgatgggggttactcctgggcgaagatgctagaaggaccg
cattactataccatcctggactctggaggcatcatcgtggccattgagcatagcaaccgt
cctatcaatgtgattaagttctccacagatgaaggccagtgctggcagagctatgtgttc
actcaggagcccatctacttcactgggcttgcttccgagcctggagccaggtccatgaac
atcagcatctggggattcacagagtctttcattacccgccagtgggtctcctacacaatc
gatttcaaagacatccttgagcggaactgtgaagaggatgactataccacgtggctggca
cactccacagaccctggagattacaaagatggctgcattttgggctataaagaacagttc
ctacggctacggaagtcatccgtctgtcagaatggtcgagactatgttgtggccaagcag
ccatctgtctgtccgtgttccctggaggacttcctctgtgactttggctacttccgtcca
gagaatgcctcggagtgtgtggagcagccggaactgaagggacatgagttagagttctgt
ctgtatggcaaggaggagcacctgacaacaaatgggtaccggaaaatcccaggagacagg
tgccaaggtgggatgagcccagcccgagaagtaaaagacttgaaaaggaagtgcacaagc
agtgtcctgagccccacgaagcagcaggactcccgcccacagggacacagcttgtcccag
aatccagcttcgcctcctcttggatacactgaaaacacacacttcctatctcctacccag
aagcagaattccaagtcgaattctgtccctattatcctggccatcgtgggactgatgctt
gtcacagtcgtagcaggagtcctcattgtgaagaaatatgtctgtggcggaaggttcctg
gtgcaccgatactctgtgctacagcaacatgcagaggctgacggcgtggaggctttggat
acagcctcccacgcgaaaagtggatatcacgatgattcggacgaggggcttggagttttc
ctgaggcaagaggccatggctgaatgggcctgtgctgtgaatggaatggaacaccgcttt
gaggtccttggagagtga
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