Mus pahari (shrew mouse): 110320938
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Entry
110320938 CDS
T05929
Symbol
Fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110320938 (Fubp1)
03041 Spliceosome [BR:
mpah03041
]
110320938 (Fubp1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110320938 (Fubp1)
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110320938 (Fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
110320938
NCBI-ProteinID:
XP_021052678
Ensembl:
MGP_PahariEiJ_G0027191
LinkDB
All DBs
Position
4:139373415..139397943
Genome browser
AA seq
662 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGVVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQ
KRPLEDGDGSWTNPSSTTHWEGMPSPFKDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAP
PDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPATTQTNGQGDQQNPAPAGQVDY
TKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQ
GQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggccgactactccacagtgcctccgccgtcgtctggctcggctggcggcggcggcggc
ggcggagtcgttaacgacgctttcaaagatgccctgcagagagcgcggcagattgcagca
aaaattgggggtgatgctggtacatcattgaattcaaatgactatggttatgggggacaa
aagagacccttagaagatggagatggctcttggacaaatccgagcagtaccacacactgg
gagggaatgccctctccttttaaagatcagccagatgctaagaaagtacctccccaaaat
gactcttttggagcacagttacctccaatgcatcagcagcaaagcagatctgtaatgaca
gaagaatacaaagttccagatggaatggttggatttataattggcagaggaggtgaacag
atctcacgcatacagcaggaatctggatgcaaaatacagatagcacctgatagtggtggc
ctaccagaaaggtcttgtatgctaactggaacacctgaatctgtccaatcagcaaaaaga
ttattggaccagattgttgaaaagggaagaccagcccctggctttcatcatggtgatgga
cctggaaatgcagttcaggaaatcatgattccagccagcaaagcaggactggttattgga
aaggggggagagacgattaaacagcttcaggaacgggctggtgttaaaatggttatgatt
caagatgggcctcaaaacactggtgctgataaacctcttaggattactggtgatccatac
aaagttcagcaagccaaggaaatggtattagaattaattcgtgatcaaggtggtttcaga
gaagtgcggaatgagtatggctcaagaataggaggaaatgaagggatagatgtcccaatt
ccaagatttgctgttggcattgtaataggaagaaatggagaaatgattaaaaaaatacaa
aatgatgctggtgttcgaattcagtttaagccagatgatggaacaacacctgatagaata
gcgcagattacaggacctccagacagatgtcagcatgctgcagaaataatcacagacctt
ctacgaagtgttcaggctggcaatcctggtggacctggacctggaggtcgaggacgaggt
agaggtcaaggaaactggaatatgggaccacctggtggactccaggaatttaatttcatt
gtgccaactgggaaaactggattgataattggaaaaggaggtgaaaccataaaaagcata
agccaacagtctggtgcaagaatagaacttcagagaaatcctccacctaatgcagatccc
aatatgaagttatttacaattcggggcactccacagcaaatagactatgctcggcaactc
atagaggagaagattgggggcccagtaaatcctttagggccacctgtaccccatgggccc
catggggttccaggtcctcatgggcctcctggacctccagggccaggaactccaatggga
ccatacaaccctgcaccttacaatcctggaccacctggcccagctcctcacggtcctcca
gccccatatgctccccagggatggggaaatgcgtatccacattggcagcaacaggctcct
cctgacccagccaaggcaggaacagatccaaactctgcagcttgggctgcttactatgct
cactattaccaacagcaggcacagcccccacctgcagctcctgctggggcaccagctaca
acccaaaccaatggacaaggagatcagcagaatccagctccagctggacaggttgattat
acaaaggcttgggaagagtactacaagaaaatgggtcaagcagttcctgctcctactggg
gccccaccaggtggtcaaccagattatagtgcagcctgggcggagtactatagacagcaa
gcagcatattatgcccagacaagtccccaggggatgccacagcatcctccagcacctcag
ggccaataa
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integrated database retrieval system
