Mus pahari (shrew mouse): 110321144
Help
Entry
110321144 CDS
T05929
Symbol
Lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04151
PI3K-Akt signaling pathway
mpah04510
Focal adhesion
mpah04512
ECM-receptor interaction
mpah05020
Prion disease
mpah05145
Toxoplasmosis
mpah05146
Amoebiasis
mpah05165
Human papillomavirus infection
mpah05200
Pathways in cancer
mpah05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110321144 (Lamc1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110321144 (Lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110321144 (Lamc1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110321144 (Lamc1)
09162 Cancer: specific types
05222 Small cell lung cancer
110321144 (Lamc1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110321144 (Lamc1)
09174 Infectious disease: parasitic
05146 Amoebiasis
110321144 (Lamc1)
05145 Toxoplasmosis
110321144 (Lamc1)
09164 Neurodegenerative disease
05020 Prion disease
110321144 (Lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
DUF6061
LOH1CR12
Csa3_N
Motif
Other DBs
NCBI-GeneID:
110321144
NCBI-ProteinID:
XP_021052879
Ensembl:
MGP_PahariEiJ_G0027943
LinkDB
All DBs
Position
5:complement(126244559..126360006)
Genome browser
AA seq
1607 aa
AA seq
DB search
MTGGGRAALALQPLGRLWPLLAVLAAVAGCVRAAMDECADEGGRPQRCMPEFVNAAFNVT
VVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQSQT
MLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSC
ENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQE
WVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFDK
LVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTG
HGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGV
MGDKCDRCQPGFHSLTEAGCRPCSCDPSGSTDECNVETGRCVCKDNVEGFNCERCKPGFF
NLESSNPKGCTPCFCFGHSSVCTNAVGYSVYDISSTFQIDEDGWRVEQRDGSEASLEWSS
DRQDIAVISDSYFPRYFIAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAGL
RVSVPLIAQGNSYPSETAVKYIFRLHEATDYPWRPALSPFEFQKLLNNLTSIKIRGTYSE
RSAGYLDDVTLQSARPGPGVPATWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCV
LCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCA
IVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNC
NRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVT
GQCQCLPHVSGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG
QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGHRCDQCEENYFYN
RSWPGCQECPACYRLVKDKVAEHRVKLQELESLIANLGTGDDMVTDQAFEDRLKEAEREV
TDLLREAQEVKDVDQNLMDRLQRVNSSLHSQISRLQNIRNTIEETGILAERARSRVESTE
QLIEIASRELEKAKMAAANVSITQPESTGEPNNMTLLAEEARRLAERHKQEADDIVRVAK
TANETSAEAYNLLLRTLAGENQTALEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGD
KAVEIYASVAQLTPVDSEALENEANKIKKEAADLDRLIDQKLKDYEDLREDMRGKEHEVK
NLLEKGKAEQQTADQLLARADAAKALAEEAAKKGRSTLQEANDILNNLKDFDRRVNDNKT
AAEEALRRIPAINRTIAEANEKTREAQLALGNAAADATEARNKAHEAERIASAVQKNATS
TKADAERTFGEVTDLDNEVNGMLRQLEEAENELKRKQDDADQDMMMAGMASQAAQEAELN
ARKAKNSVSSLLSQLTNLLEQLGQLDTVDLNKLNEIEGSLNKAKDEMKVSDLDRKVSDLE
NEARKQEAAIMDYNRDIEEIIKDIHNLEDIKKTLPTGCFNTPSIEKP
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggcgggcgggccgcgctggccctgcagcccctggggcggctgtggccgctg
ctggctgtgctggcggctgtggcgggctgtgtccgggcggccatggacgagtgcgcggat
gagggcggccggccgcagcgctgcatgccggagtttgttaatgccgccttcaatgtgacc
gtggtggctaccaacacgtgtgggactccgcccgaggagtactgcgtgcagactggggtg
accggagtcaccaagtcctgtcacctgtgcgacgccggccagcaacacctgcagcacggg
gcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccagact
atgctggccggggtgcagtaccccaactccatcaacctcacgctgcacctgggaaaggct
tttgacatcacttatgtgcgcctcaagttccacaccagccgtccagagagcttcgccatt
tataagcgcactcgggaagatgggccctggattccttaccagtactacagtgggtcctgt
gagaacacatactcaaaggctaaccgtggcttcatcaggaccggaggggacgagcagcag
gccttgtgtactgatgaattcagcgacatttctcccctcactggcggcaatgtggccttt
tcaaccctggaaggacggccgagtgcctacaactttgacaacagccctgtgctccaggaa
tgggtaactgccactgacatcagagtgacgctcaatcgcctgaacacctttggagatgaa
gtgtttaacgaccccaaagttctcaagtcttactattatgcaatctcagactttgctgtg
ggcggcaggtgtaagtgtaacggacatgccagcgagtgtgtaaagaacgagtttgacaaa
ctcgtgtgcaactgcaaacataacacatatggagttgactgtgaaaagtgcctgcctttc
ttcaatgaccggccgtggaggagggcgactgctgagagcgccagcgagtgccttccttgt
gactgcaatggccgatcccaagagtgctactttgaccctgaactataccgttccactgga
catggtggccactgtaccaactgccgggataacacagatggtgccaagtgcgagagatgc
cgggagaacttcttccgcctgggaaacactgaagcctgctctccgtgccactgcagccct
gttggttctctcagcacacagtgtgacagttacggcaggtgcagctgtaagcccggagtg
atgggtgacaagtgtgaccgttgccagcctgggttccattccctcactgaggcaggatgc
aggccatgctcctgcgatccttcaggcagcacagatgagtgtaatgttgaaacaggaaga
tgcgtttgcaaagacaacgttgaaggcttcaactgtgagagatgcaaacctggatttttt
aatctggagtcatctaatcctaaaggctgcacaccctgcttctgcttcgggcattcttct
gtgtgcacaaatgctgttggctacagtgtttatgatatctcctcgacctttcagattgat
gaggacgggtggcgcgtggaacagagagatggctcggaggcgtctctggagtggtcctca
gacaggcaggacatcgccgtgatctcagacagttacttccctagatatttcatcgcccct
gcgaagttcctgggcaaccaggtcctgagttacggacagaacctttccttctccttccga
gtggatagacgggacactcgcctctctgcagaggaccttgtgcttgaaggagctggcttg
agagtatccgtgcccttgatcgctcagggcaactcctaccctagcgagaccgcagtgaag
tacatcttcaggctccatgaagcaacggattacccttggaggcctgctctctccccgttt
gaatttcagaagctcctaaacaacttgacctctatcaagatccgtggtacatacagtgag
aggagcgctggatacttggatgatgtcaccttgcaaagtgctcgccctgggcccggagtc
cctgcaacgtgggtggagtcctgcacctgtccagtgggatatggggggcagttctgtgag
acatgcctcccaggctacaggagagaaactccaagccttggaccttacagcccgtgtgtg
ctctgtacctgtaatgggcacagtgagacctgtgacccggagacaggtgtctgtgactgc
agagacaatacagccggcccccactgtgagaaatgcagcgatgggtactatggagattca
accctgggcacctcttctgactgccagccttgtccctgccctggtggctcaagctgtgcc
attgtcccaaagacaaaggaagtggtgtgcacgcactgtccgactggcactgccggcaag
agatgtgaactctgtgatgacggctactttggagaccctctgggcagtaatgggcccgtg
agactgtgccgcccgtgtcaatgtaacgacaacatagatcccaacgcggttggcaactgc
aaccgcctgacgggtgaatgcctgaagtgcatctataacacggctggtttctactgcgac
cggtgcaaggaagggtttttcggaaatcccctggctcccaatccagccgacaaatgcaaa
gcctgtgcctgcaatccctacgggacagtgcagcagcagagcagctgtaacccggtgacc
ggccagtgccagtgtctgcctcacgtgtctggccgggactgtggtgcttgtgaccctggc
ttctacaacctgcagagtgggcaaggctgcgagaggtgtgactgccatgctttgggttcc
accaatgggcagtgtgacatccgcaccggacagtgtgagtgccagcctggcatcaccggt
cagcactgtgagcgctgtgagaccaaccactttggctttggacctgaaggctgcaaacct
tgtgactgtcaccatgaagggtccctttcgctccagtgtaaagacgacggccgttgtgaa
tgcagggaaggctttgtgggccatcgctgtgaccagtgtgaagagaactatttctacaat
cggtcttggcctggctgccaggagtgtccggcttgttaccggctggtgaaggataaggtt
gctgagcatcgagtgaaactccaggagttagagagtctcatcgccaaccttggcactggg
gatgacatggtgacagatcaagcctttgaggacagacttaaggaagcagaaagggaggtg
acggaccttctccgtgaggctcaggaagtcaaagatgtagatcaaaatctgatggatcgc
cttcagagagtaaatagcagcctgcatagccaaatcagccgactgcagaatatccggaat
actatcgaagagaccgggatcttggctgagcgagcacggtcccgagtggagagtacagag
cagctgattgagatcgcctccagggagctcgagaaagcaaaaatggctgccgccaatgtg
tcaatcactcagccagagtctacaggggagccgaacaacatgacccttttggcagaagaa
gcccgaaggcttgcagagcgtcataaacaggaagccgatgacattgtacgagtggcaaag
acagccaacgagacttcagctgaggcatataatctgcttttgaggactctggcaggagaa
aatcaaactgcgctggagattgaagagcttaaccggaagtatgaacaagcaaagaacatc
tctcaagacctggagaagcaggctgccagagtccatgaggaagccaagcgagcaggtgac
aaagccgtagagatctatgccagtgtggcccagctgacccctgtggactctgaggccctg
gagaatgaagcaaataaaatcaagaaagaagctgcagacctggaccgtctgattgaccag
aagctaaaggattatgaggacctcagggaagacatgagaggaaaggaacatgaagtaaag
aaccttctagagaagggaaaagctgaacagcagaccgccgaccaactcctggctcgagcc
gacgccgccaaggctcttgctgaagaagctgctaagaaggggcgcagtaccttacaagaa
gccaatgacattctcaacaacctgaaagattttgatagacgtgtgaacgataacaagaca
gccgcggaagaagctctaaggagaattcccgccatcaatcggaccatagctgaagccaat
gagaagacaagggaggcccagctggcgctgggcaatgctgctgctgacgccacagaggcc
aggaacaaggcccatgaggcggagaggatcgccagcgcagtgcagaagaatgccaccagc
accaaggcggacgcagaaagaaccttcggggaagttacagatctggataatgaggtgaac
ggcatgctgaggcagctagaggaggcagagaacgagctgaagaggaagcaagatgatgcc
gaccaggacatgatgatggcggggatggcttcgcaggccgctcaggaggccgagctcaat
gccagaaaggccaaaaactctgtcagcagcctccttagccagctgaccaacctcttggag
cagctgggacagctggacacagtggacctgaacaagctcaatgagatcgaaggctccctg
aacaaagccaaagatgaaatgaaggtcagcgacctggacaggaaggtgtccgacctggag
aacgaggctcggaagcaggaggcagccatcatggactacaaccgagacatagaagagatc
ataaaagacattcacaacctggaggacatcaagaagaccctaccgaccggctgcttcaac
accccgtccattgagaagccctag
DBGET
integrated database retrieval system