Mus pahari (shrew mouse): 110321222
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Entry
110321222 CDS
T05929
Symbol
Atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04136
Autophagy - other
mpah04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110321222 (Atg4b)
04136 Autophagy - other
110321222 (Atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110321222 (Atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110321222 (Atg4b)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110321222 (Atg4b)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
110321222 (Atg4b)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110321222 (Atg4b)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110321222 (Atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
110321222
NCBI-ProteinID:
XP_021053024
Ensembl:
MGP_PahariEiJ_G0027698
LinkDB
All DBs
Position
5:71059807..71089906
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRRNFPA
IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWAQRKRQPDSYFNVLNAFLDRKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
RLCRASLPCAGAAALPTDSERHCNGFPAGAEVTNRPSAWRPLVLLIPLRLGLTDINEAYV
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCFIPDESFH
CQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQQPSHLA
CQDVLNLSLDSSDVERLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagccactttgacatatgatactctccggtttgctgaatttgaagatttccct
gagacctcagagcctgtttggattctgggcagaaaatacagcattttcacagagaaggac
gaaatcttgtctgatgttgcatccagactttggtttacatacaggagaaactttccagcc
attgggggaactggccctacttcagacacaggctggggttgcatgcttcggtgtggacag
atgatctttgcccaggccctggtatgccggcacttaggtcgagattggagatgggctcag
cggaagagacagcctgacagctactttaatgtcctcaatgctttcctcgacaggaaggac
agctactattccattcaccagatagcgcaaatgggagttggcgaaggcaagtctataggc
cagtggtacgggccgaacactgttgcccaggtcctcaagaaacttgctgtattcgacaca
tggagttccttggctgttcacatagcaatggacaacactgtggtgatggaggaaatcaga
aggttgtgcagggccagccttccctgtgctggggcagctgcacttcctactgattcagag
aggcactgtaatgggttccctgctggagctgaagttaccaacaggccatcagcttggaga
ccactagtgcttctcatccctctccgcctgggactgacagacatcaatgaggcctatgtg
gagacgctgaagcactgtttcatgatgccccagtccctgggtgttattggagggaagccc
aacagtgcccactactttattggctacgttggtgaggagctcatttatctggacccccat
actacacagcctgcagtggagctgactgacagctgctttatccctgacgagagcttccac
tgccaacaccctccctgtaggatgggcattggagagcttgacccatccattgctgtggga
tttttctgtaagacggaggaagactttaacgactggtgtcagcaagtcaaaaagctatcc
cagcttggaggtgccctgcctatgtttgagctggtggaacagcagccttcccatctggcc
tgccaggatgtcctgaacctgtccctagactcttctgatgtagagagactggagaggttc
tttgactctgaggatgaagactttgaaatcttatccctctga
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integrated database retrieval system