Mus pahari (shrew mouse): 110321274
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Entry
110321274 CDS
T05929
Symbol
Tbc1d8
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110321274 (Tbc1d8)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110321274 (Tbc1d8)
Endosome - Golgi transport
Rab GTPases and associated proteins
110321274 (Tbc1d8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
110321274
NCBI-ProteinID:
XP_021053124
Ensembl:
MGP_PahariEiJ_G0027317
LinkDB
All DBs
Position
5:complement(19962898..20068827)
Genome browser
AA seq
1150 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTQKSSCYFVLQRRRGHGEGGGRLTGRLVGALDAVLDSSARVA
PFRILLQVPGSQVYSPIACGELLNGSDIYWAIATGATLEEINRHWDWLEQNLLHTLSVFD
NKDDIASFVKGKVKALIAEETSSRLAEQEEEPEKFREALVKFEARFNFPEAEKLVTYYSC
CCWKGRVPRQGWLYLSINHLCFYSFFLGKELKLVIPWVDIQKLERTSNVFLTDTIRITTQ
NKERDFSTFLNLDEVFKIMEQLADVTLRRLLDNEVFDLDPNLQEPSQITKRDLEARAQNE
FFRAFFRLPREEKLHAVADCSLWTPFSRCHTAGRIFSSDSYICFASREDGCCNVVLPLRE
VVSIEKMEDTSLLPNPIIVSIRSKMAFQFIELKDRENLVEGLLLRLKQVHANHPVHYDSS
PSDDDMASPVFYSTSICTDKFEDLEMVSSQSSEEREKEKRPLPHPEPLTAVFQQSGSQSP
DSRLSREQIKISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFSDAVTDL
ASHPGYYGNLVEQSLGRCCLVTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNP
KIGYCQSMNILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKE
HLPELAEHMSDLSALASISLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVLE
ANAEELCGSKDDGQALMVLSRFLDHIKNEDSPGPPIGSHHAFFSDDQEPYPVTDIADLIR
DSYEKFGNQSVEQIEHLRCKHRIRVLQGHEDTTKQNVLRVVIPEVSILPEDLEELYDLFK
RAHMMSCYWENHRPMALRHDPSRPYAEQYRIDARQFAHLFQLVSPWTCGVHTDILAERIF
RLLDDNMDQLIEFKAFISCLDIMYNGEMNEKIKLLYRLHIPPALTENDRDSQSPLKNPLL
STSRPLVLGKPNGDTIDYQKQLKQMIKDLAKEKDKTEKELPKMSQREFIQFCKTLYSMFH
EDPEENDLYQAIATVTTLLLQIGEVGQRGSSSGSCSQECEELQASAPPEQDSVFAEAGKS
PQAFPETEGDWTVSLEHILASLLTEQSLVNFFEKPLNIKSKLENAKLNQYSLKVLEMSHQ
PLTELKLSDL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaagccggaggaggtgctgctcaagaacgcgctgaagctctgggtgacccag
aagagcagctgctacttcgtcttgcagcggcgccgcgggcacggcgaggggggcggccgc
ctcaccggtcgccttgtgggtgctctggacgcggtgctggattccagcgcacgggttgct
ccatttcggattctgcttcaagttcccgggtcgcaggtgtattctcccatagcatgtggt
gagttactgaatggatcagacatttactgggccatagccactggtgcaacgttggaggaa
atcaaccggcactgggactggctggagcagaacctgctgcacaccctgtcagtctttgac
aacaaagatgacatcgccagctttgtcaaagggaaggtgaaggctctgattgctgaggag
accagcagcagactggcagagcaggaggaggagcccgagaagttccgagaagccctggtg
aagttcgaggccaggttcaacttccccgaggcagagaagctggtcacctactattcttgc
tgctgctggaagggcagggtgccccgccagggctggctgtacctcagtatcaaccacctc
tgcttctactccttcttcctgggcaaggaacttaaacttgtgatcccctgggtggatatc
cagaagctggagcggacctccaacgtctttctcacagacaccatccggatcactacgcag
aataaggagcgagacttctccacgtttctgaacctggacgaggtgtttaagatcatggag
cagctggcagatgtcacactccggaggctgctggacaacgaggtctttgatcttgacccc
aacctgcaggagcctagccagatcaccaagagggacctggaggccagagcacagaacgag
ttcttccgggctttcttcaggctgccgagggaggagaagctacacgctgtggcagactgt
tccctctggacgcccttcagtcgctgccacacagccggacggatattctcctctgacagc
tacatctgctttgccagcagagaggacggctgctgtaatgttgtgcttcccctgagagag
gtagtgagcattgagaagatggaagacacgagcctgctgcccaaccccatcatcgtgagc
atccgcagcaagatggccttccagttcattgagctcaaggacagagagaacttggtggag
ggcctgctgctgagactgaagcaggtccacgccaaccaccctgtgcattatgattcctcc
ccaagtgatgatgacatggcttcacctgtgttttactcaacaagcatctgcactgacaag
tttgaggatcttgagatggtgtcttctcagagtagcgaagagagagagaaggagaagcga
cccctgccacaccccgagcccctgactgccgtcttccagcagtctggcagccagagcccc
gactcccgcctgtcccgggagcagataaaaatcagtctgtggaacgaccacttcgtagag
tatggcaggaccgtgtgcatgttccgcactgaaaagatccggaagctggtggccatgggg
atccccgagtctttgcgtggaaggctgtggctgcttttctcagatgctgtgacggacctg
gcctcgcaccctgggtactatgggaatctggtggagcagtctctggggcgctgctgcctg
gtgacagaggagatagagagggacctgcaccgctctctgcctgagcaccctgccttccag
aatgaaactggcattgctgccttgaggcgggtgctgacagcgtatgcccaccggaacccc
aagattggatactgccagtccatgaacatcctgacctctgtgttgctgctgtatgccaaa
gaggaggaagccttctggctgctggttgctgtgtgtgaacggatgctgcctgattacttc
aaccaccgggtgatcggggctcaggtggaccagtctgtgtttgaggagctcatcaaggag
cacctcccagagctggcggaacacatgagcgacctctcggcgttagcgtccatctccctc
tcctggttcctgactctgttcctcagcatcatgcctctggagagtgctgtgaatgttgtt
gactgcttcttctacgatgggatcaaggccatcttccagctggggctggctgtactggaa
gcgaatgcagaggaactgtgcggtagcaaagatgatggacaggccctgatggtcctcagc
aggtttctagatcacattaagaatgaagacagcccgggcccccccattggcagccaccat
gcctttttctctgatgatcaggagccctatcctgtgaccgacattgctgacctgatccgg
gactcctatgagaaatttggaaaccagtctgtggagcagattgaacatctacgctgcaag
cacaggatcagggtcctgcaaggacacgaggacaccaccaagcagaacgtgctccgtgtc
gttatcccagaagtctccattcttcctgaagacctcgaggaactctatgacttattcaag
agagcacacatgatgagctgttattgggagaaccacaggcccatggccctgcgccatgat
cccagcaggccctatgctgaacagtaccgcattgatgcccggcagtttgcacacctattc
cagttggtatcgccatggacctgtggggtccatacagacatccttgctgagaggatcttc
aggctcctggatgacaacatggaccagctcatagagttcaaagccttcataagctgtcta
gacatcatgtacaacggagaaatgaatgagaagattaagctgctatacaggcttcatatc
cccccagcactcactgaaaatgacagagatagccagtcaccattgaagaatcctctgttg
tcaacttcaagacccctggtactgggcaagcccaatggtgacacaattgattatcagaaa
cagctgaaacaaatgattaaggatttagccaaagaaaaggataaaacggagaaagaattg
ccaaaaatgagccagagagaatttatccagttctgtaaaactctgtacagtatgttccat
gaggatccagaggaaaatgatctgtatcaagccattgccacagtaaccactctgctactg
cagattggagaagtgggccagcgaggtagcagttcaggaagctgctcccaagaatgtgag
gagctgcaggcctcggctcctcctgaacaggactcagtttttgctgaggctgggaagagt
ccccaggctttcccggagactgaaggggactggactgtgtctcttgaacacattttggcg
tccctcctcactgagcagtcactggtgaacttttttgaaaagccactcaatattaaatcc
aaacttgaaaatgccaagctcaatcaatacagtctcaaagttttggaaatgagccaccaa
cctctgacagaactgaagctgagtgacctgtag
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