KEGG   Mus pahari (shrew mouse): 110321286
Entry
110321286         CDS       T05929                                 
Symbol
Rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03320  PPAR signaling pathway
mpah04659  Th17 cell differentiation
mpah04919  Thyroid hormone signaling pathway
mpah04920  Adipocytokine signaling pathway
mpah04928  Parathyroid hormone synthesis, secretion and action
mpah05200  Pathways in cancer
mpah05202  Transcriptional misregulation in cancer
mpah05207  Chemical carcinogenesis - receptor activation
mpah05216  Thyroid cancer
mpah05222  Small cell lung cancer
mpah05223  Non-small cell lung cancer
mpah05226  Gastric cancer
mpah05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    110321286 (Rxrg)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    110321286 (Rxrg)
   03320 PPAR signaling pathway
    110321286 (Rxrg)
   04919 Thyroid hormone signaling pathway
    110321286 (Rxrg)
   04928 Parathyroid hormone synthesis, secretion and action
    110321286 (Rxrg)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110321286 (Rxrg)
   05202 Transcriptional misregulation in cancer
    110321286 (Rxrg)
   05207 Chemical carcinogenesis - receptor activation
    110321286 (Rxrg)
  09162 Cancer: specific types
   05226 Gastric cancer
    110321286 (Rxrg)
   05216 Thyroid cancer
    110321286 (Rxrg)
   05222 Small cell lung cancer
    110321286 (Rxrg)
   05223 Non-small cell lung cancer
    110321286 (Rxrg)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110321286 (Rxrg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpah03000]
    110321286 (Rxrg)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mpah03310]
    110321286 (Rxrg)
Transcription factors [BR:mpah03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    110321286 (Rxrg)
Nuclear receptors [BR:mpah03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   110321286 (Rxrg)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4 CRT10
Other DBs
NCBI-GeneID: 110321286
NCBI-ProteinID: XP_021053155
Ensembl: MGP_PahariEiJ_G0028064
LinkDB
Position
5:140075887..140118308
AA seq 463 aa
MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSVALPTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHEDMPVERIL
EAELAVEPKTESYGDMNVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MRMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEMLETPLQIT
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtatggaaattattcccacttcatgaagtttcccaccggctttggtggctcccctggt
cacaccggctcgacatccatgagcccttcggtagccttgcccacggggaagccaatggac
agccaccccagctacacagacaccccagtgagtgccccccggacgctgagcgctgtggga
acccccctcaatgctctcggctctccgtatagagtcatcacttctgccatgggtccaccc
tcaggagcactggcagctcctccgggaatcaacttggtggctccacccagctctcagctc
aatgtggtcaacagtgtcagcagctctgaggacatcaagcccttaccaggtctgcctggc
attggaaatatgaactacccatccaccagccctgggtctctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtgtacagctgtgaaggctgcaaa
ggcttcttcaaaaggaccatcaggaaagatctcatctacacctgccgggataacaaagat
tgtctcatcgacaagcgccagcgcaaccgctgccagtactgtcgctaccagaagtgcctg
gtcatgggcatgaagcgggaagctgtgcaagaagaaaggcagaggagccgagagcgagca
gagagtgaggcagaatgtgccagtagtagccatgaagacatgcccgtggagaggattcta
gaagctgaacttgctgtggaaccaaagacagaatcctacggtgacatgaacgtggagaac
tcaacaaatgaccctgttaccaacatatgccatgctgccgataagcaacttttcaccctc
gtggagtgggccaaacgcataccccacttctcagacctcaccttggaggaccaggtcatc
ctgctccgggcagggtggaatgaactgctgattgcctccttctcccaccgctcggtttcc
gtccaggatggcatcctgctggccaccgggctccacgtgcacaggagcagcgctcacagc
gcgggagtcggctccatcttcgacagagtcctcacagagttggtgtccaagatgaaagac
atgcggatggataagtcggagctggggtgcctacgggccatcgtgctgtttaatccagat
gccaagggtttatccaatccctctgaggtggagactcttcgagagaaggtttatgccacc
ctggaggcctataccaagcagaagtatccggaacagccaggcaggtttgccaagcttctg
ctgcgtctccctgctctgcgctccatcggcctgaaatgcctggaacacctcttcttcttt
aagctcattggcgacacccccatcgacagcttcctcatggagatgctggagaccccactg
cagatcacctga

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