Mus pahari (shrew mouse): 110321389
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Entry
110321389 CDS
T05929
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110321389 (Smarcal1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110321389 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110321389
NCBI-ProteinID:
XP_021053276
Ensembl:
MGP_PahariEiJ_G0027483
LinkDB
All DBs
Position
5:51175160..51266647
Genome browser
AA seq
910 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLSEQPQSTASGSSAAGPSQSKQGSLLNLLAEPS
KPAGHAAIFKQQNLKNSFPTDQRPHSSCCSQPSPAEEATGLWKVQGEMSTACPKPNPSPP
GVSNPPLLGYKSSEGQPQATQDTRASSSGSFPRDPKLEAKAVRPSTSGQSISDSFYALGG
KTPRTEGRPPSTLQTTPQNTSFLRGACIRTGDRFRVKIGYNPELIAVFKSLPSRHYDSFT
KTWDFSMSDYRALMKAVERLSTVSLKPLDEVGGSVGGQTSLPSAPSLTFVTGKCMLISRV
RFEVDISYSEVVIGLFKQMESRSYDVKTRKWSFLLEEHNKLIARSRELKQVQLDPLPKTV
TLAFASQMEKTSPKLKADVPEADLSGVDAKLVSNLMPFQREGVSFAISKRGRLLLADDMG
LGKTVQAICIAAFYRKEWPLLVVAPSSVRFTWEQAFLRWLPSLSPESINVVVTGKGRLAA
GLVNIVSFDLLCKLERQLKTPFKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGT
PAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAI
MLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKDKTKQQQKEALLVFF
NRTAEAKIPCVVEYIMDLLESGREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPSA
DRETLCQRFQLSKGHTVALLSITAANMGLTFSTADLVVFAELFWNPGVLIQAEDRVHRIG
QTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETSFSEMTEATDYVHKDPKQKTI
YDLFQQSFEDDGNDMEFLEAAASFELGSTSGTSGNGSQDLGDLLDEDEGSPPKKSRFEFF
DNWDSFTSPF
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccacttacagaggagcagaggaaaaagattgaagagaatcggcaaaaagct
ttggcccgtcgagctgagaagttgtcagaacagccacagagcacagcttcaggctcctct
gctgccggcccatctcagtccaagcagggctctctcctgaatctcctagcggagccttca
aagccagcgggccatgccgccattttcaagcaacagaatctcaagaattcatttcctact
gatcagaggcctcatagttcctgctgttctcagcccagcccagcagaggaagcaacaggg
ctatggaaggtccaaggagagatgtccacagcctgcccaaagcctaacccaagtcctcca
ggagtctctaacccgccacttttgggttataaatccagcgagggtcagccccaggcaacc
caggacacaagagcttcctcttctggatcatttcccagggaccccaagttagaggccaag
gcagtgagaccttctacctctgggcagagcatttcggacagcttttatgccttaggggga
aaaacacctaggacagaagggagacccccaagcacactgcaaaccacaccccaaaacaca
agctttctacggggagcatgcataaggaccggggatcgcttccgggtaaagatcggctac
aacccagagctcattgccgtgtttaagtctctgcccagcaggcactatgattcctttaca
aagacgtgggacttcagcatgagcgactacagagccttgatgaaggcagtcgagcgactc
tccacggtctccctgaagccactggacgaggttggtggcagtgtcggaggacagaccagc
cttccctcagctccatcccttacctttgtgacagggaaatgcatgctcatctctcgagtc
cgcttcgaggttgacatcagctattcagaggtggtgattggcctgtttaaacagatggag
tcccggagttacgatgtcaagaccaggaagtggagctttctcctggaagagcacaataaa
ctaattgcaaggtcacgtgaactgaagcaagttcagctggaccctctgcccaagacagtg
accctggcatttgcatctcagatggaaaaaacctctcccaaactgaaagcagatgtgcca
gaagctgacctttccggagtggatgccaagctcgtgtctaacctcatgccctttcagagg
gagggagttagctttgccatatcaaaaagaggccgcctgctacttgccgatgacatgggc
ctagggaagaccgtccaagctatctgcatagcagctttttaccgaaaggaatggccactg
ctggtggtggcgccttcctctgtgcgcttcacctgggagcaggcctttcttcggtggctt
ccatctcttagcccagagagcatcaatgtggtggtgaccgggaagggccgcctagccgct
ggcttggtcaacattgtcagctttgaccttctttgcaagttggagaggcagctaaaaacc
cctttcaaagtcgtcattattgatgaatcgcacttcctcaagaacattaagactgcccgc
tgccgagcagctgtgcctatcctaaaggttgccaagagggtgatcctactgtcaggcaca
cccgccatgtcgaggcctgcagagctctacacgcagatcattgctgtcaagccaaccttc
ttccctcagtttcatgcctttggacttcgttactgtgatgccaagcggctcccttggggc
tgggactactcgggctcctccaacctgggcgagctgaagctgctgctggaggaggcaatc
atgctgcggcggctcaaatccgacgtgctctcccagcttccggccaagcagcgcaagatg
gtggtggtcaaccctggtcggatcagttccagggctaaggcagccctggatgcagcagcc
aaagaaatgaccaaggacaaaactaaacagcaacagaaagaagctctccttgtcttcttc
aacagaacagcagaagctaaaatcccatgtgttgttgaatatatcatggaccttctggag
agcggacgagagaagtttctagtgtttgcacaccataaggtgattctggatgcagttgct
aaggagcttgagaggaagaacgttcagcacatccggattgatggctccacgccctcagca
gaccgggagacactgtgccagcggttccagctgtccaaagggcacacagtggcactgttg
tccatcaccgccgccaacatgggcctcaccttctccacagccgatctggttgtgtttgct
gagctgttctggaacccaggggtgctgatccaggccgaggaccgtgtgcaccgcattgga
cagacaaactctgtgagcatccactacctggtggcaaaaggcacagcagatgactacctt
tggcctctgattcaagagaagattaaagttctgggggaagctggactttctgagaccagt
ttctcggaaatgacggaagctacggactacgtgcacaaggacccaaagcagaagacgatc
tatgacctgttccagcagtcctttgaagatgatggaaacgacatggaattcctggaagca
gcagcatcctttgaactaggaagtacctcaggaacctctggaaacggttcccaggatctg
ggagatctcttagatgaagacgaaggcagcccgccaaagaaaagtagatttgaattcttt
gataattgggacagctttacctctcccttttga
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