Mus pahari (shrew mouse): 110321533
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Entry
110321533 CDS
T05929
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah05014
Amyotrophic lateral sclerosis
mpah05200
Pathways in cancer
mpah05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110321533 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110321533 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
110321533 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110321533 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110321533 (Tpr)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110321533 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Seryl_tRNA_N
Nup49_C
Motif
Other DBs
NCBI-GeneID:
110321533
NCBI-ProteinID:
XP_021053483
Ensembl:
MGP_PahariEiJ_G0027924
LinkDB
All DBs
Position
5:123485753..123545164
Genome browser
AA seq
2422 aa
AA seq
DB search
MTSRGFDGSRRGSLRRAGARETASEAADGAAPTIGFRASPCSLASPSAAAAAAASAATPA
DMAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFKVESEQQYFEIEK
RLSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAKEE
LEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVAVKYR
EKRLEQEKELLHNQNSWLNTELKNKTDELLALGREKGNEILELKCNLENKKEEVLRLEEQ
MNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAK
SNELTRAVDELHKLLKEAGEANKTIQDHLLQLEESKDQMEKEMLEKIGKLEKELENANDL
LSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKQENKRI
NKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHS
SVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVS
YRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLTELEQLRESRQH
QMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSSTSQTVSTPAPEPV
IESTEAIEAKAALKQLQEIFENYKKEKIDSEKLQNEQLERLQEQVTDLRSQNTKISTQLD
FASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEV
RAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSS
QIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQK
DIATLKQHLNNVEAQLASQSTQRTGKGQPGDRDDIDDLKSQLRQAEEQVNDLKERLKTST
SNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQ
DDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQ
NKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKAESQLLECKASWEERERVLK
DEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKDVVQAPLNISLNEEGKSQEQILEI
LRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQH
EELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSG
MLQAEKKLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGRLK
AEIARSNASLTNNQNLIQSLREDLSKARTEKEGIQKDLDAKIIDIQEKVKTITQVKKIGR
RYKTQFEELKAQQNKAMETSTQSSGDHQEQHISVQEMQELKDTLSQSETKTKTLEGQVEN
LQKTLSEKETEARSLQEQTVQLQSELSRLRQDLQDKTTKEEQLRQQMNEKDEKTWKAIAV
ARSKIAQLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELRE
HQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPS
KVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVP
VFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVE
VVQSSPVERPSTSTAVFGTVSAAPSSSLPKRPREEEEDSTMEAGDHVSEDPVEMPLPKKL
KTVTPVGTEEEVMAEESTDGEAETQAYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQID
LGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEEDDDDEEDDTGM
GDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGEGN
TSAAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRI
QMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVEAESEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQF
NRQRGISHAMGGRGGINRGNIN
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccggggttttgacgggtcccgccgcgggagtctcaggcgagcaggcgcgcgg
gagacagcgagcgaggccgcggacggggcggctccgacgattgggttccgcgcttctccc
tgctctttggcttctccttcagccgctgctgccgctgccgcctccgccgcgaccccggcc
gacatggcggcggtgttgcagcaagtgctggagcgcccggagctgaacaaactgcccaag
tcgacgcagaacaaacttgagaagttcctggccgagcagcagtcggagatcgactgcctc
aaggggcggcacgagaagtttaaggtggagagcgaacaacaatactttgagatagagaag
aggctctcccagagtcaggagaggcttgtcaatgaaacccgggagtgtcagaacttgagg
ctggagcttgagaagctaaataaccaagtaaaagtgttaactgagaaaaacaaagaactg
gaaactgctcaagaccgtaatctaggcattcagagccagtttacaagagcaaaggaagag
ttagaagctgaaaaaagagatttaatcagaaccaatgagaggttatctcaggaagttgaa
tatttaacagaggatgttaaacgtctaaatgaaaaacttaaagaaagcaatactacgaag
ggtgaacttcagttaaaattggatgaacttcaagcttctgatgttgctgtgaagtatcga
gaaaaacgcttagaacaagaaaaggaattgctacacaatcaaaattcatggctgaacaca
gagttgaaaaacaaaactgatgaactgttggctctaggaagagaaaaaggaaatgaaatt
ctggaacttaagtgtaatcttgaaaacaaaaaagaagaggttttgagactggaagaacag
atgaatggcttgaaaacatcaaacgaacatcttcagaaacatgtagaggatttgttgaca
aaattaaaagaggccaaagaacagcaggccagtatggaagagaaattccacaatgaatta
aatgctcacattaagctctctaatctctacaagagcgctgctgatgactcagaggcaaag
agtaatgaactgacccgggcagtggatgagctgcacaaactgctcaaagaagcaggagaa
gccaacaaaacaatacaagatcatcttctacaattggaagaatctaaagatcagatggaa
aaagaaatgcttgaaaaaataggaaaattggagaaggaattagagaatgcaaacgacctg
ctttccgctacaaaacgtaaaggagctatattgtctgaagaagagcttgcagccatgtct
cccaccgcagcagctgtggctaaaattgtaaagcctggcatgaaattaactgagctatat
aatgcttatgtggaaactcaggatcagttgcttttggaaaaacaagaaaataaaaggatt
aataagtatctggatgagatagtaaaagaagtggaagccaaagcaccgattttgaaacgc
cagcgcgaagagtatgagcgtgcacagaaagctgtggccagtctttctgcaaagcttgag
caagctatgaaggagattcagcgattgcaggaagacactgataaagccaacaaacattca
tcagtacttgaaagggacaatcagagaatggaaatacaaataaaagatctttcacaacag
attagagtgctcttgatggaacttgaagaagcaaggggtaaccatgtaattcgggatgag
gaggtcagctctgctgacataagtagttcgtctgaagtgatttcgcagcacctagtatct
tacaggaatattgaagagcttcagcagcagaatcagcgtctgctatttgctcttcgggaa
cttggggaaaccagggaacgagaagaacaagagacaacttcctctaaaattgctgaactt
caacataaacttgagaactctctcactgaactggaacagctccgtgagtcacgacaacat
cagatgcaacttgttgattccatagttcgtcagcgtgacatgtaccgaattttattgtca
caaacaacaggaatggccattccattacaagcttcaagtttagatgatatttctcttctc
tcaactccaaaacgttcaagtacatcacagactgtttccactcctgctccagaacccgtc
attgaatccacagaggctatagaagcaaaggctgcccttaaacagttgcaggaaatcttt
gagaactataaaaaagaaaaaatagacagtgagaaacttcaaaatgagcagctagagaga
cttcaagagcaagtcacagacctgcgctcacaaaacactaaaatttctactcagctagat
tttgcttctaaacgttacgaaatgctgcaagacaatgtagaaggatatcgccgagaaata
acatctctacaagagagaaatcagaaactcactgctactactcagaagcaggaacagatc
atcaacacgatgacgcaagacttgagaggagccaatgaaaagctagctgttgcagaagta
agagcagaaaatttgaagaaggaaaaagaaatgcttaaattgtctgaagtccgtctgtct
cagcaaagagagtctttgttagctgaacagaggggacagaacttgttgctgactaatcta
caaacaatccagggcatactagagcgatctgagactgaaaccaaacaaaggctgagtagc
cagatagaaaaattggagcatgagatctctcacctgaagaagaaattggaaaacgaggta
gaacaaagacatacgcttacaaggaatctagatgttcaactattagataccaagagacag
ctagatacagaaataaatcttcatcttaacacaaaagaactgttaaaaaatgctcagaag
gacattgctacactgaaacagcaccttaataatgtggaagcccagcttgcttcacagtcc
acacagagaactggtaaaggtcagcctggtgacagagatgacattgatgatcttaaaagt
cagctaaggcaggctgaagaacaggtcaatgacttgaaggagagactcaagacaagtacc
agtaatgtggagcagtatcgagccatggtgaccagcttagaagattccctgaacaaggag
aaacaggtgactgaggaggttcataagaacattgaagttcgcttgaaagaatcagcagag
tttcagacacagttggaaaagaaattgatggaagtagagaaggaaaagcaagaacttcag
gatgacaagaggaaagccatcgagagcatggaacagcaattaagtgaattgaagaaaaca
ctgtctagtgttcagaatgaagtacaagaagctcttcagagagcaagcacagctttaagt
aatgaacagcaagccaggcgtgactgtcaagaacaagctaaaatcgctgtggaagcccag
aataagtatgagagagaattgatgctacacgctgctgatgttgaagctctgcaagctgcc
aaggaacaggtttcaaaaatgacatcaatccgtcagcatttggaagaaaccactcagaaa
gcagaatcacagttgttggaatgtaaagcatcttgggaagagagagagagagtgttgaag
gatgaagtttccaaaagtgtgtctcgctgtgaagatctagagaaacaaaacagactactt
catgatcaaatcgaaaaattaagtgacaaggtagtcacctctatgaaggatgttgtgcaa
gcaccattaaatatatctctcaatgaagaagggaaatctcaagaacaaattttagaaatt
cttagatttattcgacgagaaaaagaaattgctgaaactaggtttgaggtggctcaggtc
gagagtctgcggtaccgacaaagagttgaacttctagaacgggagttgcaagaactgcag
gatagcctgaatgcagaaagggagaaggtgcaggtaactgcaaaaacaatggcacaacat
gaagaactgatgaagaaaactgaaacaatgaatgttgttatggagaccaataagatgcta
cgggaggaaaaggaaaggctcgaacaaaacctacaacaaatgcaagccaaggtgaggaaa
ctggagttagatattttacccttacaagaagccaatgctgaactgagtgagaaaagcggc
atgctccaggcagaaaagaagctactggaagaggatgtcaagcgttggaaagcacggaac
cagcatctaataaatcaacagaaagatccagatacagaagaatatcgaaagttgctttct
gaaaaggaaattcacactaagagaatccagcagctaaatgaagaagttggaaggcttaag
gctgaaattgcaagatcaaatgcatccttgactaacaaccagaatttaatccagagtctg
agggaagatttgagtaaagcacgaactgaaaaggaaggcattcagaaagatttagatgcc
aaaataattgatatacaggaaaaggtcaaaacaatcactcaagtcaagaaaattggacgc
aggtacaagactcagtttgaagaacttaaagcgcagcaaaataaggccatggagacttcc
actcagtcttcaggagaccatcaggaacagcatatctctgtccaggaaatgcaggagctc
aaagataccctcagccaatctgaaacaaagacaaagacacttgagggtcaagtagagaat
ctgcagaagacattatctgaaaaagagacagaagccagaagtctccaggaacagacagtg
cagcttcagtctgaactgtcacgccttcgtcaggacctccaggataaaaccacaaaggag
gagcagctccgacagcaaatgaatgaaaaggatgaaaaaacttggaaggcaattgcagta
gccagatcaaaaattgcacaactatctggtgtgaaagatcagttaactaaagaaaatgaa
gagcttaaacaaaggaatggagctttagatcagcagaaagatgaacttgatgtccgaatg
actgctcttaagtcccagtatgaaggtcggattagtcgcttagagagagagctcagagag
catcaggagagacaccttgagcagagagatgagcctcaagaacccactaataaggctcca
gaacagcagagacaaatcacactgaaaaccactccagcttctggtgaaagaggaattgcc
agcacatcagacccaccaacagccaatatcaagccaactcctgttgtttctactccaagt
aaagtgacagctgcagctatggctgggaacaagtcgacacccagggcaagtatccgccca
atggttacacctgcaacggtcacaaatccaaccactaccccaacagcaaccgtaatgcct
actacacaggtggagtcacaggaagctatgcagtcagaagggccagtggaacatgttcca
gtctttggaagcacaagtggatctgttcgttctactagtcctaatgttcagccctccatt
tctcagcccatcctaactgtacagcagcaaacacaagctacagcttttgtacaacccact
caacagagccacccacagattgagcctgcaaatcaagagttgtccccaaacatagttgag
gtagtacaaagttccccagtggagcggccatctacttccacagcagtatttggcactgtt
tcagctgccccaagttcctccttgccaaagcgccctcgggaggaggaagaggacagcacc
atggaagcaggagaccacgtctctgaggaccccgtggaaatgcctctcccgaagaagctg
aagacggtcacacctgtgggaaccgaggaagaagttatggcagaagaaagtactgatgga
gaggcagaaactcaagcctataatcaggactctcaagattccattggagaaggagttacc
cagggagattatacaccaatggaagacagtgaagaaacatcacaatctctacaaatcgat
cttggaccgcttcagtcagatcagcagactacttcctctcaagatggtcaaggcaaagga
gatgatgtaattgtaattgacagtgatgatgaagatgatgatgaagaaaatgatggagaa
catgaagattatgaagaagatgaagaagacgatgatgatgaagaagatgacacggggatg
ggagatgagggtgaagatagtaatgaaggaactggtagtgcagatggtaatgatggatat
gaagctgatgatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagt
atgggtggagctgaaagtaatcagagagctgctgattctcaaaacagtggtgaaggaaat
acaagtgcagcagagtcttcgttctctcaggaggttgctagagaacagcagcccacatca
gcgtctgagagacagactccacaagcaccacagtcaccaaggcgcccaccacatcctctt
cccccacgcctgaccattcacgccccacctcaggagttgggaccaccagttcagagaatt
cagatgacccggaggcagtctgtagggcgtggtcttcagttgactccaggaataggtggc
atgcaacaacacttttttgatgatgaagacagaacagttccaagtaccccaactcttgtg
gtgccacatcgcactgatgggtttgctgaagctattcattccccacaggttgccggtgtt
cctagattccgttttgggccacctgaagacatgccacagacaagttccagtcactctgat
cttggccaacttgcttctcaaggaggtttgggaatgtatgaaacacccctctttctggct
catgaggaagagtctggtggccgcagcgttcccactacgcctctccaagtagcagcccca
gtgactgtgtttactgagagtaccacctctgatgcttcagaacatgcctctcagtctgtt
ccgatggtgacaacatctacaggcactttatccacgacaaatgaaacagcagcaggtgac
gacggagatgaagtatttgtagaggcagagtctgaaggtatcagttcagaggctggccta
gaaattgatagccagcaggaagaggagcctgtccaagcatctgatgaatcagatcttccc
tctaccagccaagatcctccttcgagctcctctgtagataccagtagtagtcagccaaag
cctttcagacgagtaagacttcagacaaccttgagacagggtgttcgtggtcgtcagttt
aaccgacaaagaggtataagccatgcaatgggaggaagaggaggaataaatagagggaat
attaattaa
DBGET
integrated database retrieval system
