KEGG   Mus pahari (shrew mouse): 110321583
Entry
110321583         CDS       T05929                                 
Symbol
Ncstn
Name
(RefSeq) nicastrin isoform X1
  KO
K06171  nicastrin
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04330  Notch signaling pathway
mpah05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    110321583 (Ncstn)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110321583 (Ncstn)
SSDB
Motif
Pfam: Nicastrin Ncstrn_small Peptidase_M28
Other DBs
NCBI-GeneID: 110321583
NCBI-ProteinID: XP_021053566
Ensembl: MGP_PahariEiJ_G0028121
LinkDB
Position
5:complement(144627624..144644238)
AA seq 708 aa
MATARGGSGPDPGSRGLLLLSFSVVLAGLCGGNSVERKIYIPLNKTAPCVRLLNATHQIG
CQSSISGDTGVIHVVEREDDLKWVLTDGPNPPYMVLLEGKLFTRDVMEKLKGETSRIAGL
AVTLAKPNSTLSFSPSVQCPNDGFGIYSNSYGPEFAHCKKTLWNELGNGLAYEDFSFPIF
LLEDENETKVIKQCYQDHNLGQNGSAPSFPLCAMQLFSHMHAVISTATCMRRSFIQSTFS
INPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAESAVAS
FVTQLAAAEALHKAPDVTTLSRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVRLENIDS
FVELGQVALRTSLDLWMHTDPMSQKNESVKNQVDNLLATLEKSGAGVPEVVLRRPAQSQA
LPPSSLQRFLRARNISGVVLADHSGSFHNRYYQSIYDTAENINVTYPEWQSPEEDLNFVT
DTAKALANVATVLARALYELAGGTNFSSSIQADPQTVTRLLYGFLIRANNSWFQSILKHD
LRSYLDDRPLQHYIAVSSPTNTTYVVQYALANLTGKLTNLTREQCQDPSKVPNESKDLYE
YSWVQGPWNSNKTERLPQCVRSTVRLARALSPAFELSQWSSTEYSTWAESRWKDIQARIF
LIASKELEFITLIVGFSILVFSLIVTYCINAKADVLFVAPREPGAVSY
NT seq 2127 nt   +upstreamnt  +downstreamnt
atggctacggctaggggcggctctgggcctgacccaggaagtcggggtcttcttcttctg
tccttttccgtggtactggcaggactgtgtgggggaaactcagtggagaggaaaatctac
attcccttaaataaaacagctccttgtgtccgcctgctcaacgccactcatcagattggc
tgccagtcttcaattagtggggacacaggggtcatccacgtagtggagagagaagatgac
ctgaagtgggtgttgaccgatggccccaaccccccttacatggttctgctggagggcaag
ctctttaccagagatgtaatggagaagctgaagggggaaaccagtcgaattgctggtctt
gccgtgaccctagccaagcccaactcaacgttaagcttctctcctagtgtgcagtgccca
aatgatgggtttggtatttactccaactcctatgggccagagtttgctcactgcaagaaa
acactgtggaatgaactgggcaatggcttggcttatgaagactttagtttccccatcttt
cttcttgaagatgagaacgaaaccaaggtcatcaagcagtgctatcaagatcacaacctg
ggtcagaatggctctgcaccaagcttcccattgtgtgctatgcagctcttctcacacatg
cacgccgtcatcagcactgccacctgcatgcggcgcagcttcatccagagcaccttcagc
atcaacccagaaatcgtctgtgaccccttatccgactacaacgtatggagcatgcttaag
cctataaatacatctgggggactagaacctgacgtcagggttgtggttgcggccacacgg
ctggatagtcggtcctttttctggaatgtggccccaggggcagaaagtgctgtagcctcc
tttgtcactcagctggccgcagctgaagctttgcacaaggcacctgatgtgaccacccta
tcccgaaatgtgatgtttgtcttcttccagggggaaacttttgactacattggcagctca
cggatggtctatgatatggagaatggcaagtttcccgtgcggctcgagaacatcgactcg
tttgtggagctgggacaggtggccctaagaacttcactagatctctggatgcacacagat
cccatgtctcagaaaaacgagtctgtgaaaaaccaggtggacaatcttctggccactctg
gagaagagcggtgctggtgtccctgaagttgtcctgaggagaccagcccagtcccaggcc
cttccaccttcgtctctacaacgatttcttcgggctcgaaacatctctggcgtggtcctg
gctgaccactctggctccttccacaaccggtattaccagagcatttatgacacagctgag
aacattaatgtgacctatccagagtggcagagcccagaagaggacctcaactttgtgaca
gacactgccaaggcactggcgaatgtggccacagtgctggcgcgtgcactgtatgagctt
gcaggaggaaccaacttcagcagctccatccaggctgatccccagacagttacacgtctg
ctatatgggttcctgattagagctaacaactcgtggtttcagtctatcttgaaacatgac
ctaaggtcctatttggatgacaggcctcttcaacactacatcgccgtctccagccctacc
aacacgacttacgttgtgcagtatgccttggcaaacctgactggcaagctgaccaacctc
acccgagagcagtgccaggatccaagtaaagtcccaaatgagagcaaggatttatatgaa
tactcatgggtacaaggcccttggaattccaacaagacagagaggcttccacagtgtgtg
cgctccacagtgcgactggccagggccttgtcccctgcctttgaactgagtcagtggagc
tccacggaatactctacgtgggccgagagccgctggaaagacatccaagctcggatattc
ctaattgccagcaaagagcttgagttcatcacgctgatcgtgggcttcagcatccttgtc
ttctctctcatcgtcacctactgcatcaatgccaaagccgacgtcctgttcgttgctcca
agagagccaggagctgtgtcttactga

DBGET integrated database retrieval system