Mus pahari (shrew mouse): 110321583
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Entry
110321583 CDS
T05929
Symbol
Ncstn
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04330
Notch signaling pathway
mpah05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110321583 (Ncstn)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110321583 (Ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
110321583
NCBI-ProteinID:
XP_021053566
Ensembl:
MGP_PahariEiJ_G0028121
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All DBs
Position
5:complement(144627624..144644238)
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AA seq
708 aa
AA seq
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MATARGGSGPDPGSRGLLLLSFSVVLAGLCGGNSVERKIYIPLNKTAPCVRLLNATHQIG
CQSSISGDTGVIHVVEREDDLKWVLTDGPNPPYMVLLEGKLFTRDVMEKLKGETSRIAGL
AVTLAKPNSTLSFSPSVQCPNDGFGIYSNSYGPEFAHCKKTLWNELGNGLAYEDFSFPIF
LLEDENETKVIKQCYQDHNLGQNGSAPSFPLCAMQLFSHMHAVISTATCMRRSFIQSTFS
INPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAESAVAS
FVTQLAAAEALHKAPDVTTLSRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVRLENIDS
FVELGQVALRTSLDLWMHTDPMSQKNESVKNQVDNLLATLEKSGAGVPEVVLRRPAQSQA
LPPSSLQRFLRARNISGVVLADHSGSFHNRYYQSIYDTAENINVTYPEWQSPEEDLNFVT
DTAKALANVATVLARALYELAGGTNFSSSIQADPQTVTRLLYGFLIRANNSWFQSILKHD
LRSYLDDRPLQHYIAVSSPTNTTYVVQYALANLTGKLTNLTREQCQDPSKVPNESKDLYE
YSWVQGPWNSNKTERLPQCVRSTVRLARALSPAFELSQWSSTEYSTWAESRWKDIQARIF
LIASKELEFITLIVGFSILVFSLIVTYCINAKADVLFVAPREPGAVSY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctacggctaggggcggctctgggcctgacccaggaagtcggggtcttcttcttctg
tccttttccgtggtactggcaggactgtgtgggggaaactcagtggagaggaaaatctac
attcccttaaataaaacagctccttgtgtccgcctgctcaacgccactcatcagattggc
tgccagtcttcaattagtggggacacaggggtcatccacgtagtggagagagaagatgac
ctgaagtgggtgttgaccgatggccccaaccccccttacatggttctgctggagggcaag
ctctttaccagagatgtaatggagaagctgaagggggaaaccagtcgaattgctggtctt
gccgtgaccctagccaagcccaactcaacgttaagcttctctcctagtgtgcagtgccca
aatgatgggtttggtatttactccaactcctatgggccagagtttgctcactgcaagaaa
acactgtggaatgaactgggcaatggcttggcttatgaagactttagtttccccatcttt
cttcttgaagatgagaacgaaaccaaggtcatcaagcagtgctatcaagatcacaacctg
ggtcagaatggctctgcaccaagcttcccattgtgtgctatgcagctcttctcacacatg
cacgccgtcatcagcactgccacctgcatgcggcgcagcttcatccagagcaccttcagc
atcaacccagaaatcgtctgtgaccccttatccgactacaacgtatggagcatgcttaag
cctataaatacatctgggggactagaacctgacgtcagggttgtggttgcggccacacgg
ctggatagtcggtcctttttctggaatgtggccccaggggcagaaagtgctgtagcctcc
tttgtcactcagctggccgcagctgaagctttgcacaaggcacctgatgtgaccacccta
tcccgaaatgtgatgtttgtcttcttccagggggaaacttttgactacattggcagctca
cggatggtctatgatatggagaatggcaagtttcccgtgcggctcgagaacatcgactcg
tttgtggagctgggacaggtggccctaagaacttcactagatctctggatgcacacagat
cccatgtctcagaaaaacgagtctgtgaaaaaccaggtggacaatcttctggccactctg
gagaagagcggtgctggtgtccctgaagttgtcctgaggagaccagcccagtcccaggcc
cttccaccttcgtctctacaacgatttcttcgggctcgaaacatctctggcgtggtcctg
gctgaccactctggctccttccacaaccggtattaccagagcatttatgacacagctgag
aacattaatgtgacctatccagagtggcagagcccagaagaggacctcaactttgtgaca
gacactgccaaggcactggcgaatgtggccacagtgctggcgcgtgcactgtatgagctt
gcaggaggaaccaacttcagcagctccatccaggctgatccccagacagttacacgtctg
ctatatgggttcctgattagagctaacaactcgtggtttcagtctatcttgaaacatgac
ctaaggtcctatttggatgacaggcctcttcaacactacatcgccgtctccagccctacc
aacacgacttacgttgtgcagtatgccttggcaaacctgactggcaagctgaccaacctc
acccgagagcagtgccaggatccaagtaaagtcccaaatgagagcaaggatttatatgaa
tactcatgggtacaaggcccttggaattccaacaagacagagaggcttccacagtgtgtg
cgctccacagtgcgactggccagggccttgtcccctgcctttgaactgagtcagtggagc
tccacggaatactctacgtgggccgagagccgctggaaagacatccaagctcggatattc
ctaattgccagcaaagagcttgagttcatcacgctgatcgtgggcttcagcatccttgtc
ttctctctcatcgtcacctactgcatcaatgccaaagccgacgtcctgttcgttgctcca
agagagccaggagctgtgtcttactga
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