Mus pahari (shrew mouse): 110321602
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Entry
110321602 CDS
T05929
Symbol
Aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110321602 (Aff3)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110321602 (Aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
TMEM106_N
Motif
Other DBs
NCBI-GeneID:
110321602
NCBI-ProteinID:
XP_021053599
Ensembl:
MGP_PahariEiJ_G0027310
LinkDB
All DBs
Position
5:complement(18762867..19211710)
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AA seq
1250 aa
AA seq
DB search
MDSFDLALLQEWDLESLWGEDILSQRNDSLVLEVQASASRCRSVYEPDRNALRRKERERR
SQETQQDSGGFNSGYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGVPQTPVNKIDEHFVAESRAQPQPPSVCSTASSTPTAVPVQQGKRGTMGWQKAGHPP
SDGQQRAAQQGSLRTLLGDGVGRQQTRAKQVCNMEAGLQTQERPPAMAAKHGGSGHCVQN
FPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSTETAVHCAAYRGVPANKPESA
RAKAKLAKFSIPKQAEESRSGESNSCVEEIIREMTWLPPLSAIQAPAKVEPSKFPFPNKD
SQLVSSGHSNPKKADAEPESPDNGASNTSTLEDDLKLSSDDEEGEQQAAQRTALRALADS
SVVQQTNCRGSAPSSKGGSSSSSGGSSSSSDSESTSGSDSETESSSSESESEGSKPPHCS
SPEAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGPERNQYYTPPVKDEGQDCGKLTEI
CQASLRDKELKTTCKEEQRPRTANKAPGSKSVKQKSPPAAVAVTAAALPPAVPSAPTESA
PAPTRRSAGKKPTRRTERTSAGDGANCHRPEEPVAPDTLGASVVGPLEPPKTRPCGNSRT
GHRKELRSSVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQEEYVLSKAPT
TTGSEQRLKEAASSSSSSNSTSRASVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPL
KDSDEVRSLWVKIDLTLLSRIPEHLSQEPGVLSAPSAKDTDSAPASHALDTPAEKTLPKS
KRKRKCDNEDDYREVKKAQGRKESAPRLATSTNNTLAGNHCNVNVNSLAIPINKNEKMLR
SPTSPLSDTCKHKYASEDLTSSSRPHSNGLLTSASSNKEPKAESQLQTLAGDLTKASHNS
SENGSLHSKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRSADYFMREAKRMKHKADAMVE
KFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPE
DKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGSSGKSTGS
PSPMSPNPSPASSVGSQGSLSSSSGLSPSTIVSIPQRIHQMAANHVSITNSILHSYDYWE
MADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRSSVHLS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggtgaa
gatatcctaagccagaggaatgattctctagttctggaagttcaggcgtcagccagcaga
tgcaggagtgtctatgaaccggacaggaatgcgttacggaggaaagagcgagaaagaaga
agtcaagaaacccagcaggacagtggcggctttaactcgggttactcactcttcagcgaa
ccctacaagactaacaagggggatgaactctccaaccggatccagaatacactaggaaat
tatgacgagatgaaagactttttaactgatagatccaaccagagtcatcttgttggcgtc
cccaagccgggtgtccctcagactcccgtgaacaagatcgatgaacattttgtggcagag
tcgagagcccagccccagcccccatcagtctgcagcactgcgtcctccacacctacagct
gtccctgtgcagcagggcaagagaggcaccatgggctggcagaaggctgggcacccacca
tccgatggccaacagagagcagcgcaacagggctctctcaggaccttgcttggagatggt
gttggcagacagcagacaagggccaagcaagtgtgcaatatggaggcggggctacagacc
caggagaggccacctgcaatggcagccaagcacggcggcagtggacactgtgttcagaac
tttcccccatccctggcttcaaaacccagcctggtgcagcagaaaccaactgcctacgtg
aggccgatggatggccaggaccaggctcctgacgaatctcctaagcttaagtcatctaca
gaaactgctgtgcactgcgcagcctacagaggggtcccggccaacaaaccagagtcagcc
cgagccaaggctaagcttgccaagttcagcatccccaagcaagcagaggagagcagatct
ggagaaagcaacagctgtgtggaagaaataattcgggagatgacctggcttcctccactt
tctgccattcaagctcctgccaaagtggaaccaagcaagttcccattcccaaataaggac
tcacaacttgtatcctctggacacagtaatccaaagaaagctgatgcggagccagagagt
ccagacaatggcgcatcgaacacttcaactctggaagacgaccttaagctaagcagtgat
gatgaagagggtgagcagcaggcggcccagagaacagctctccgcgctctagctgacagc
tccgtggttcagcagaccaactgtagaggttcggcgccttccagcaagggcggcagcagc
agcagcagcggcggcagcagctcctccagcgactcagagagcacttccggctccgactcc
gagacggagagcagctccagcgagagcgagagcgagggcagcaagcctccgcactgctcc
agccctgaggccgaacctgcgtcctctaacaagtggcagctggataaatggctaaacaaa
gttaatcctcacaagccgccaattctgatccaaaatgaaagccacggcccggaaaggaat
caatactacacgccgccggtgaaagatgaagggcaagactgcgggaaacttaccgagatc
tgccaagccagcctgagggacaaggagctcaagaccacctgcaaggaggaacagcggccg
aggaccgcaaacaaggcccctggcagcaaaagtgtaaagcaaaagtccccacccgctgcg
gtggctgtgactgcagctgccctcccacccgcggtgcccagcgcacccacggagagcgcg
cctgcgccaacccgcaggtcagcaggcaagaagcccacccggcgcaccgagaggacctca
gccggggacggtgccaactgccaccggcctgaggagccagtggccccagacacgctgggg
gcgagcgtggtgggaccgctagagccccccaaaaccaggccctgcggtaacagcagaaca
ggccaccgcaaggagctgcgctcctccgtgacctgtgagaagcggcgcacgagggggctg
agcagaatcgtccccaaatccaaggagtttattgaaacagaatcttcgtcttcctcttcc
tcctcggactcagacctggagtcggagcaagaggagtatgtcctgtccaaggctccgacc
accactggaagcgagcagcggctgaaggaggccgccagcagcagcagtagcagcaacagc
acctcccgggcttctgtgggctccatcaacgccaggaccaccagtgacattgccaaggag
ctagaggaacagttctacacgctggtcccctttggcaggaatgaactgctatctccgcta
aaggacagcgatgaggttaggtctctctgggtcaaaattgacctgactctcctgtccagg
atcccagaacacctgtcccaggagcctggggtcttgagtgctccttcggccaaggacact
gatagtgccccagccagtcatgcattagacacacctgctgaaaagactttgccaaaatcc
aagaggaaacgcaagtgcgacaatgaagatgactacagggaggtaaagaaggcccaggga
aggaaggagagcgccccacgcctcgccacctccactaataacaccttggctggcaaccac
tgcaacgtgaacgtcaacagcttggcaataccaataaacaaaaatgaaaagatgctccgg
tcacccacttcgccactctcagacacatgtaaacacaaatacgccagcgaggacctgact
tcttccagccgacctcacagcaatgggttgttgacttcagcatcttccaacaaggagcct
aaggctgagagccagctgcagacgcttgctggggacctcacgaaagcgtctcacaacagt
tccgaaaatggctccctccatagcaagtcgaggccccagacggagccgtggtctccaggt
tccaatggccacagggactgcaagagacagaaactaatcttcgatgacatgcctcgaagt
gcagattattttatgcgagaagccaagcggatgaaacataaagcagacgccatggtggag
aagttcgggaaggccctgaactatgccgaagccgccttgtccttcatcgagtgtggaaac
gcaatggaacaagggccaatggaatccaagtctccgtacaccatgtactcggagacagtg
gagctcatcaggtatgctatgagactaaaaacccactcaggccccaatgccacaccagag
gacaaacagttagctgcgctttgttaccgatgcctggctctcctatactggcggatgttt
cgactcaaaagagaccatgctgtaaaatattcaaaagcacttatcgactatttcaagaat
tcatcgaaagctgcccaagccccatccccatgggggtccagtggcaagagcactggaagc
ccatcccccatgtctcccaacccttctcccgccagctccgtggggtctcagggcagcctc
tccagctccagcggcctgtccccatcgaccatcgtcagcatcccccagcgcattcaccag
atggcggccaatcacgtcagcatcaccaacagcatccttcacagctacgactactgggag
atggctgataacctggccaaggaaaacagagagttcttcaatgacctggatttgctcatg
ggacctgtcaccctgcacagcagcatggaacacttggtccagtactcccagcaaggcctg
cattggctgcggagcagcgtacacctgtcctag
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