Mus pahari (shrew mouse): 110321752
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Entry
110321752 CDS
T05929
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110321752 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110321752 (Clasp1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110321752 (Clasp1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110321752 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
HEAT_DAAF5
RTP1_C1
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
110321752
NCBI-ProteinID:
XP_021053871
Ensembl:
MGP_PahariEiJ_G0027744
LinkDB
All DBs
Position
5:93285861..93505665
Genome browser
AA seq
1555 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANEKN
FDDEDSVDGNRPSSASSSSSKAPSSSRRNVSLGTTRRLMSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSAASRGSTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLDGTTTKAEGRIRTRRQSSGSTTN
VASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGCGGLAGGSSRGPPVT
PSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFT
PLDRFGLGQSGRIPGSVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYS
DDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLL
KSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIE
SLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLG
ALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLS
PSRLWGWSADGLSKPPPPFSQPNSIPTAPSHKTLRRSYSPSMLDYDTENLNSEEIYSSLR
GVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDN
KTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDL
VADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIR
ALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQC
IKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKA
SVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcgaatggagtcctgtctggcccaggtgctgcagaaggatgtggggaagcgg
ctgcaggttggccaggagctcatagactatttctcagacaaacagaagtctgctgacctt
gagcatgaccagaccatgttagataagcttgtggatggactcgctacctcttgggtgaac
tccagcaattacaaggtggttctcctgggcatggacatcctgtcggcactggtgactagg
ctgcaggaccggttcaaggcgcaaatcggcacagtgttgccaagtctaatagacagactg
ggagatgctaaagactccgtgagggagcaagaccaaaccctgctgctaaagatcatggat
caagctgctaatccccagtatgtgtgggacagaatgctcggaggcttcaaacacaagaac
ttccgcaccagggagggcatctgcctctgccttatcgcgacactcaatgcctctggggcc
cagactctaacactaagcaagattgtgccacatatatgtaacctattgggagatcccaac
agccaggttcgagacgcagcaataaacagtctggtggagatttatagacatgtaggtgaa
cgtgtgagggcagacctcagtaagaaaggactgccacagtcccggttgaatgtcattttt
acaaaatttgatgaagtccaaaagtctggaaatatgatacagtctgcaaatgaaaaaaat
tttgatgatgaagattctgtggatggcaacaggccttcttctgccagctcctcatcatcc
aaggccccatcaagttcccggaggaatgttagcctggggaccacccgcaggctcatgtca
tccagtcttggatctaagtcttcagctgcaaaagaaggtgctggtgctgtggatgaagag
gattttattaaagcctttgatgatgtacctgtagtgcagatttactccagccgagacctc
gaggaatccataaacaaaatcagagaaatcctgtcagatgacaagcatgactgggagcag
agggtcaatgctctaaaaaagattagatcgttactcttggctggggctgctgagtacgat
aacttctttcaacacttgcgtcttctggacggggcctttaaactctctgctaaggacctg
cggtctcaggtagtgcgggaagcttgtatcacactggggcacctgtcatcagttctggga
aataagtttgatcatggagctgaagccattatgccaactatctttaatttaatcccgaac
agtgccaaaattatggctacttctggtgttgtagctgttagactaatcattcggcacact
cacatccctcgactgatccctgtcataaccagcaattgtacctctaaatctgtcgccgtc
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacacattcacta
gaaagacatatatcagtattagctgaaaccataaagaaaggaatacacgacgctgattcc
gaagcaagaatagaagccaggaaatgctactggggtttccacagtcacttcagccgagaa
gcagaacacctgtaccacactttggagtcctcctatcagaaggccctacagtcccacttg
aagaactcggacagcatcgtgtctctgccgcagtcagaccgatcctcttccagctctcaa
gagagtctcaaccgaccgctttcagccaaaagaagtcccactggcagcgctgcatccaga
ggctctacagttagtaccaaatctgtgtcgacgacaggatctctccaacgatctcgaagt
gatattgatgtgaacgcagcagccagtgccaaatccaaagtctcctcatcctcaggatcc
accgccttcagctctgcagcagcactgcctccaggatcctatgcatccttagacggtact
accactaaagcggagggtcgaatccgcacgagacggcagagctcggggagcaccaccaat
gttgcctctacaccctccgacagtcggggccgcagtcgcgccaaagtggtttcacagtct
cagcgatccagatctgctaaccctgctggtgctggcagccggtcaagttcccctgggaag
cttttgggaagtggctgtggtggacttgctgggggttcctcaagaggcccaccggtaaca
ccatcctcagaaaaacgaagcaagatccccaggagtcagggatgtagccgagaaacaagt
cctaaccggattggattagcacggagcagccgtatcccccgacccagcatgagtcagggg
tgcagccgcgataccagccgtgagagcagccgcgatacaagccctgctcggggctttaca
ccactcgatcggtttgggctgggccagtcaggacgaatccctggttctgtgaacgccatg
cgagtcttgagtaccagcactgacctggaagctgcagtggccgacgctctgctgttagga
gacgccaggagcaagaagaagcctgtgagaaggagatacgagccctatggaatgtactct
gatgatgacgccaacagtgatgcctccagtgtgtgctctgagcgctcatatggctccagg
aatggtggcattccccattatctgcggcagactgaagatgtagcagaggttctcaaccat
tgtgccagttccaactggtcagaacggaaagaggggctcctgggcctgcagaacttactg
aagagccaaagaacactgagtcgagtagaattgaagagactgtgtgagattttcacccga
atgtttgccgaccctcacagcaagagagttttcagtatgtttttggagaccctcgtggat
tttataatcattcataaggatgacttgcaagactggcttttcgtccttctcacacaacta
cttaagaaaatgggagcagacttacttggatctgtgcaagcaaaagttcagaaggctcta
gatgtcaccagggattcctttccatttgatcaacaatttaacattttgatgagatttatt
gtggatcagactcaaactccaaacctcaaggtcaaagtggcaatcctgaaatatatcgag
tctctagccagacagatggaccccacagattttgtgaattccagtgaaacaagacttgct
gtttctaggatcataacatggactacagaaccaaagagttcagacgtgagaaaggcagca
cagattgtgctcatctctctgtttgaactgaacactcctgaatttaccatgttacttggt
gccttgccaaaaacattccaggatggtgccaccaaactcctgcataaccacctcaagaac
tccagtaacaccggtgtgggatctccaagcaatacaattggccggacaccttcccgccac
cccagcagcaggaccagccccctgacctcacccaccaactgttcccatgggggactatct
ccaagtcggttgtggggttggagtgccgacgggctatcgaagcccccacctcccttttct
cagcctaactccattcccaccgctccctcccacaagactctcaggcgctcttactctccc
agcatgctggactatgacacagagaacctgaactctgaagaaatctacagctctttgcgt
ggagtcacagaggccattgaaaagttcagcttccgaagccaggaggatctaaacgagcca
atcaaacgagatggcaagaaggattgtgatatcgtgtcccgagatgggggagcagcctca
cctgccaccgaaggccggggaggtagtgaggtagaaggaggcaggatggctttggacaac
aagacctccctgctcaacacgcagcctccacgtgcctttccggggccaagagcacgggaa
tacaacccgtatccctactccgacaccatcaacacctatgacaagacggctctgaaggaa
gcagtgtttgatgatgacatggagcagctccgagatgtgcccattgaccactcggacctg
gtggccgacttgctgaaagagctatctaaccacaatgagcgtgtggaggagaggaagggc
gcactgctggagctgctcaagatcacccgggaggacagcctgggcgtgtgggaggagcac
ttcaagaccatcctgctgctgttgctggaaactctcggagacaaagaccattccattcga
gctctggcactgagagttttacgggagattctgagaaaccagccagcaagattcaaaaac
tacgcagaactgacgatcatgaagactctggaagcccacaaagactcccacaaggaggtg
gtgagagcggccgaggaagctgcgtccacgctagccagctcaatccacccagagcagtgc
atcaaagtgctgtgtccaatcatccagacagccgactaccccatcaacctggctgccatc
aagatgcagacaaaggtggtggagaggatcaccaaggagtccttgctgcagctcctcgtc
gacatcatccccggcctgctgcagggttacgacaacactgagagcagtgtacggaaagcc
agtgtgttttgcttagtggcaatctattccgtaatcggagaagatctgaaacctcacctc
gcacagctcacggggagcaagatgaagctgctgaacttatatataaagagggcccagact
accaacagcaacagcagctcttcctctgatgtgtccacacacagctag
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integrated database retrieval system
