Mus pahari (shrew mouse): 110321791
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Entry
110321791 CDS
T05929
Symbol
Pogk
Name
(RefSeq) LOW QUALITY PROTEIN: pogo transposable element with KRAB domain
Organism
mpah
Mus pahari (shrew mouse)
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DDE_1
BrkDBD
HTH_Tnp_Tc5
KRAB
Motif
Other DBs
NCBI-GeneID:
110321791
NCBI-ProteinID:
XP_021053945
Ensembl:
MGP_PahariEiJ_G0028054
LinkDB
All DBs
Position
5:complement(139014571..139024760)
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AA seq
624 aa
AA seq
DB search
MSGHSPRRPLRRRRPLGREMESRASPLNLTLKEEQKEEEIEIQELEDGSIHMQKVQICSE
GAWVPALFDEVAIYFSDEEWEVLXQKALYREVMRMNYETVLSLEFPFPKPDMISRLEREE
ECPNSDEWRLQGVTFAENEESDFRTPDWASPXSATSYFPQPQHFNSFGLRLPQDLTELPE
WSEGYPFYMAMGFPGYDLSADDLASKFQFSRGMRRSYDAGFKLMVVEYAESTNNCQAAKQ
FGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPKNGRFALVDQRXAXYVRYMQAKGDPITRE
AMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYDLSLRHKVPVPQHLAEDLSEKLITYQ
QSVLALRRTHDYEVAQMGNADETPICLEVPSXVTVDNQGEKPILVKTPGREKLRITAMLG
VLADGRKLPPYIILRGTYIPPGKFPSGMEIHCHCYGWMTEDLMQDWLEVVWRRRTGAVPR
QRGMLILNGFRCHATDSVKSSMESMDTDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQYS
NWLLAGNLALSPTGNAKKPPLGLFLEWIMVAWNSISSESIVQGFRKCHISSNLEEEGDVL
WEIEGELPKEXPKECGPESVAEGD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccacagccctcgtcgccccttgcggcgacgccgcccgctcggccgggaaatg
gagtcccgagcctcccctctaaatttgaccctgaaagaagagcaaaaggaagaagagatt
gagatccaagaattggaggatggctccatacatatgcagaaagtacagatctgctcggaa
ggcgcgtgggtaccagctctatttgatgaggtggccatatatttttcggacgaggagtgg
gaagttctgnnacaaaaagccctctaccgggaagtcatgaggatgaattatgagactgtc
ctgtccctggaatttccattccccaagccagatatgatcagtcggttggaaagggaagag
gagtgtcctaattctgatgagtggcggctccagggagtaacctttgcagaaaatgaagaa
tctgactttaggactccagattgggcaagcccaatnagtgccacctcctattttcctcaa
cctcagcacttcaatagctttggcctgcgtctgcctcaggacctcactgaactgcccgag
tggagtgagggctaccccttctatatggccatgggcttccccggctatgacctctcagct
gacgacttggcaagcaagtttcagttcagtcgtggcatgcgccgcagttatgatgcaggg
ttcaagctgatggtggtggagtacgctgagagcaccaacaactgtcaggctgccaagcag
tttggggtgttggaaaaaaatgttcgagactggcgcaaagtgaagccacagctccagaat
gctcatgccatgcggcgggcattccgaggccccaagaatggaaggtttgctctggtagac
cagcgantggctnagtatgtcagatacatgcaggccaaaggggaccccatcactagggag
gcaatgcagttgaaagctcttgaaatcgcccaggaaatgaacattccagagaaagggttc
aaggcaagtctgggctggtgtcgaagaatgatgagaaggtatgacctgtctctgaggcat
aaagtgccggtccctcagcacctggccgaggacctgagtgagaagctcatcacttaccag
cagagcgtgctggctctgcgcaggacacatgactatgaggtngcccagatgggcaatgca
gatgagacgcccatctgcttagaagtgccctctagngtgactgttgacaaccagggtgaa
aagcccatcttggtcaagacaccaggcagggagaaactgaggatcacagccatgctgggg
gtcttggctgatgggaggaagttaccaccntacatcattttgagggggacatacatcccc
cctgggaagtttcccagtggcatggaaatccactgccactgctatggatggatgactgag
gacttgatgcaagactggttagaagttgtgtggagacggagaactggagctgtgcccaga
caacgaggnatgctgatcctgaatggcttccggtgccatgccactgactctgtgaagagc
tccatggagagcatggacacagacatggtgatcatcccagggggcctgacctcacagctg
caggtgctagatgtggttgtctacaagccactgaacgacagtgtccgggcccagtattcc
aactggctcctggctggnaacctggcactgagccccacgggaaatgctaagaagccacca
ctgggcctcttcctggagtggatcatggttgcatggaacagcatctcgagtgaatcaatt
gtccaggggttcagaaagtgccacatctccagcaacttagaggaagaaggtgacgtcctc
tgggaaattgagggcgagttgcccaaagaancaccgaaagagtgtggtcctgaaagtgtg
gctgagggtgactga
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