Mus pahari (shrew mouse): 110321875
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Entry
110321875 CDS
T05929
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04721
Synaptic vesicle cycle
mpah04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
110321875 (Rims1)
04721 Synaptic vesicle cycle
110321875 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110321875 (Rims1)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
110321875 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
110321875 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
110321875
NCBI-ProteinID:
XP_021054105
Ensembl:
MGP_PahariEiJ_G0027241
LinkDB
All DBs
Position
5:complement(3858577..4339096)
Genome browser
AA seq
1612 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEEGGPDRNWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSR
SQTPLSTAAVSSQDTASHGAPLDRNKGAEPSQQPLGPEQKQASRSRSEPPRERKKAPGLS
EQNGKGGLKSERKRVPKSVVQPGEGTADERERKERREIRRLEKGRSQDYPDRLEKREDGR
VAEDEKQRKEEEYQTRYRSDPNLARYPVKAPLEEQQMRMHARVSRARHERRHSDVALPHT
EAAAAAPAEATAGKRAQTTARVSPPESPRARAPTAQPPAEHGPPAPRPAPGPAEPPEPRV
PEPLRKQGRLDPGSAVLLRKAKREKAESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRR
QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT
WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV
VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP
LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA
TDLPPRADGRPRNPYVKMYFLPDRSDKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRER
MLEITVWDQPRVQDEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFLPR
RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRASARESKASTLTVPEQQRT
THHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPADHRSR
HVESQYSSEPDSELLMLPRAKRGRSAECLHMTSELQPSLDRARSASTNCLRPDTSLHSPE
RERHSRKSERSSIQKQSRKGTASDADRVLPPCLSRRGYAIPRATDQPVIRGKHTTRSRSS
EHSSIRTLCSMHHLAPGGSAPPSPLLTRTHRQGSPTQSPPADTSFGSRRGRQLPQVPVRS
GSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDHEQYSKYNIHKDQYRSCDNASAK
SSDSDVSDVSAISRASSTSRLSSTSFMSEQSERPRGRISSFTPKMQGRRMGTRAIMKSTS
VGGEIYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHK
KLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRVGPDSQFSDFL
DGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVY
LLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQ
ILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSSGPPCIRS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgaggtcctcgcccacccacggtgcctccccctatgcaa
gagctgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaagaaaaagaagaggccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaagccagccccatcaacca
ccactgaacattttcagatgtgtctgtgttcccagaaaaccaagcagcgaagagggaggc
ccagacagaaactggagattgcatcaacagtttgaaagctacaaggaacaagtgagaaaa
atcggagaggaagccaggcgttaccagggcgagcacaaagatgatgccccgacgtgtgga
atctgtcacaagacaaagtttgctgatggatgtggccatctctgctcctattgtcgcacc
aagttctgtgcacgctgtggaggccgagtgtctctgcgatcgaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcaacaagagatactaacgaaatctggagcg
tggttcttcggaagtggtcctcagcagcccagtcaagatgggactctgagtgacacagct
acaggtgctggatctgaggtgccaagagaaaagaaagctcggctccaagagcgatcgagg
tctcagacgcccttgagtacagcagctgtctcttcccaagacactgcttcccatggtgca
ccattggacaggaacaaaggagctgagccctcacagcaacccttgggtcctgaacagaag
caggcatccaggtcaagaagtgagccaccaagggaaaggaagaaggctccagggctttcg
gaacagaatggcaagggaggcctgaagagcgagcgcaaacgtgtccccaagtctgtggtg
caacctggggaagggaccgcggatgagcgggagaggaaggagaggcgggaaatccgcagg
ctggagaaagggcgctctcaggactacccggaccggctggagaaacgcgaggatggcagg
gtggctgaagatgagaagcagaggaaggaggaggagtatcagactaggtaccgcagcgac
ccgaacctggctcgctacccggtgaaggcgccgctggaggaacagcagatgcgcatgcac
gcccgggtgtcccgagcgaggcacgagcggcgccacagcgacgtggcgctcccgcacacc
gaggctgccgccgccgcgccggccgaggccacggcgggcaagcgcgcgcagaccaccgcc
agggtctctcccccggagtccccgcgcgcacgcgcgcccactgcccagcctcccgccgag
cacgggccgccggcgccgcggccagccccgggtcccgcagagccgcccgaaccgcgcgtc
cccgaaccgctccgtaagcagggccgcctggaccccggctcggccgtgctcctgcgcaag
gccaagcgcgagaaagcggagagcatgctgcggaacgactcgctgagctccgatcagtct
gagtccgtgcggccgtccccgcccaagccgcaccggcccaagcggggaggcaagaggcgt
cagatgtcggtgagcagctcggaggaggagggcgtgtccacgccggagtacacgagctgc
gaggacgtggagctggagagcgagagcgtgagcgagaaaggtgacttggattactactgg
ctggatcctgccacgtggcacagcagggaaacgtcgcctattagttcgcatcctgtaacg
tggcagccatctaaagaaggagaccgattaattggccgcgttattcttaacaaaagaaca
accatgcccaaagaatcaggtgcattattgggtctaaaggtggttggaggaaaaatgacg
gacttagggcgccttggtgctttcatcaccaaagtaaagaagggtagcctggcagatgtt
gtcggacacctaagagcaggggatgaagttctagagtggaatggtaaacccctgccggga
gcaacaaacgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgacatccccaggatccctgagagctcccatcccccc
ctggagtccagttcaagttcctttgaatctcagaagatggaaaggccttccatttctgtt
atttctcccaccagccctggagctctgaaagatgccccacaagtcttaccagggcaactc
tcagtgaagctgtggtatgataaggtggggcaccagctgattgtaaatgttctacaagca
acagatctaccccctagagcagatgggcgtcccagaaatccctatgtaaaaatgtatttt
cttccagatagaagcgacaaaagtaaaagaagaaccaaaacggtaaagaaacttctagag
ccaaaatggaatcaaacatttgtctactcacacgtacatcgtcgagactttcgagagcga
atgttagaaattactgtgtgggatcagccgagagtacaggacgaggagagtgaatttctc
ggagagatcctcatagaactggaaacagcacttttagatgatgagccccattggtataaa
ctccagacacatgatgaatcttcactacctctgcctcagccatcaccgttcttgcccagg
cggcatatccatggagaaagctccagcaaaaagctacaaagatctcagcgaatcagtgat
agtgacatctcagattatgaggttgatgatggtattggcgtagtgcctccagtgggctat
agagctagtgctagagagagtaaagcatccacgttaacagtgccagagcagcagagaact
acacatcaccgctcacgttccgtgtctcctcatcgcggcgatgatcagggaaggcctcgt
tcacgtttaccaaatgtgccgttacagaggagcttagatgaaatccatccaacacgaagg
tcacgttctccaacccgacaccatgatgcctcccgaagcccggccgatcacagatccaga
catgtggaaagtcagtattcatcagagccagacagtgagcttctcatgctgcccagagca
aaacgaggacgaagtgcagaatgcctacacatgaccagtgaactgcagccctctcttgac
agggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaa
cgagaaaggcactccagaaagtctgaaagatctagcatccaaaaacagtctaggaaaggc
acagcctctgacgcagacagggttctcccaccatgcctttctagaaggggatacgcaatc
ccaagagcaaccgatcaaccggtcattaggggaaagcataccactcgctcccggtcgagc
gagcactctagtatcagaaccctgtgttctatgcaccaccttgcccctggagggtcggcg
ccgccttctccgcttctgacaagaacgcaccgacaaggaagccccacccagtctcctcca
gctgacacatcctttggcagtcgccgcggaagacagctcccacaggtgccggttcgaagc
ggcagtatagaacaagcgagcttagtagtggaggaacgaacaagacagatgaaaatgaag
gtacaccggtttaagcagacaacagggtctgggtctagtcaagagcttgaccacgagcag
tactccaagtacaacatacataaagatcagtacagaagctgtgataacgcgtctgccaag
tcatcagatagtgatgtcagtgatgtgtccgccatttccagagccagcagtacctcacgc
ctcagcagcacaagctttatgtcagagcagtctgagcgccccaggggtaggatcagttca
tttacccccaaaatgcaaggcagacggatggggactagagccatcatgaagagcaccagt
gtaggcggagagatatacacactggagcataatgacggcagccagtcagacacggccgtg
ggcaccgttggagccggtggaaagaagcggagatccagcctgagtgccaaagtggtagcc
attgtgtctcgaagaagtaggagcacatcgcagctcagccagacagagtccggccacaag
aagttaaaaagcaccatccagaggagtacagaaacgggaatggcggctgaaatgcggaag
atggtgagacagccaagccgggagtccacggatggcagcatcaatagttatagctcagaa
ggaaacttaatatttcctggagttcgagtcgggcctgacagccagttcagcgatttcctt
gatggactgggaccagcccagcttgttggccgccaaacccttgccacccccgccatggga
gatatccaaatcgggatggaggataagaagggtcagttggaggttgaggttatcagagcc
cggagccttacacaaaaacctggctccaaatctacacctgctccctatgtgaaggtttat
cttttggaaaatggagcctgtattgccaaaaagaagacaagaattgcacggaaaactctc
gatcccttgtatcagcagtccctggtgtttgatgaaagtccacagggtaaagttcttcag
gtgattgtctggggtgactatggaagaatggaccacaaatgcttcatgggtgtggctcaa
atcttgttggaagaacttgatctgtccagcatggtgattggatggtataaattgttccct
ccatcctcactggtggatcccacactcacccccctcacccgccgggcttcccaatcgtct
ctggaaagttcgtctgggccaccctgcatccggtcatag
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