Mus pahari (shrew mouse): 110321878
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Entry
110321878 CDS
T05929
Symbol
Arid5a
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5A
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110321878 (Arid5a)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
ARID
110321878 (Arid5a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
110321878
NCBI-ProteinID:
XP_021054115
Ensembl:
MGP_PahariEiJ_G0027279
LinkDB
All DBs
Position
5:16932093..16946825
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AA seq
620 aa
AA seq
DB search
MLKGGRPDLVCVVNSPIELQKLKPHEDVVLQTAPPAKENAEQSEESDLLQLPVSPKPEDE
QSRSQSPTQLQDSPEAGGEQEEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKA
VEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLP
PTKPRKQYKMAKELRGDDGTGEKLKKAKDSEERRVEQTTPGKTKSDATGQTQPPCQGPSR
DGTEQPGPVSGPSPPLTGASSCPEAYKRLLSSFYCKGAHGIMSPLAKKKLLAQVSKAEAL
QCQEEGCRHGARSPNKDIQESPQSLRGPAENSEHQLSPREGLQAPGGSTRMEAQVGPCPT
APMFSGSFHAYPTEVLKPVSQHPRDFFSGLKDGVLLGPPGKEEGPTTKGSQLVWGGDANR
PSAFHRGSTRKRSFYPKPKACWVSPMAKVPAESPGAPSPHPSSPGLGSKRGLGEDGFAHG
GKKLRAVSPFLKEVDAKESGGKPAAPGLAVSCLLGPTPGPTPPETYRGTMLRCPLNFTSS
ADPLKGQASLPFSPLVIPAFPAHLLATTGPSPMAASLMHFPPTPYDAVLRNRLGPASSAW
HMPPVTAYAAPHFFHLNTKL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagggaggcaggcctgacctcgtctgtgtggtgaactctcccattgagctccag
aagctaaaaccacacgaggacgtagtgctccagacagcccctccggccaaagagaacgca
gagcaatcagaggaaagtgacctcctgcagctccctgtatcccccaagcccgaggatgag
cagagcaggagccagagccccacccagctccaggactcccctgaggcaggtggggagcag
gaggaggaacaggccttcctggtcagcctctacaagttcatgaaggagcgacacacgccc
atcgagagggtgccccatcttggcttcaagcagattaacctgtggaagatctacaaggca
gtggagaagctgggggcctatgagctggtgacaggccgccgcctctggaagaacgtgtat
gatgaacttggaggcagccccggcagcaccagtgcagccacatgcacacgccgccactat
gagaggctggtcctcccatatgtgcggcatctgaagggggaggacgacaagccactgccc
cctaccaagcccaggaagcaatacaagatggccaaggagctgaggggagatgatgggacc
ggtgagaagctgaagaaagccaaggactcagaggagaggcgggtggagcagaccacgcca
ggaaagaccaaatcagatgccacgggccagacacagcctccctgccagggaccctcgagg
gatggcacagaacagccgggcccagtgtctgggccctctccaccactcacgggtgccagt
agctgccccgaggcctacaagcggctcttgtccagcttctactgcaaaggggcgcatggc
atcatgtcaccactggccaagaagaaactcctggcccaggtcagcaaggcggaggccttg
cagtgccaagaagagggctgtcgccatggagcacggagtcccaacaaggacattcaagaa
agtccccagagcctaagagggccggctgagaactctgaacaccagctaagcccccgggaa
ggattgcaggcccccggtgggagcaccaggatggaggcccaagtgggcccctgccctaca
gcccccatgttctcaggctcttttcatgcgtaccccaccgaagtgctgaagcctgtcagc
caacaccccagggacttcttctccggccttaaagacggggtgctgttgggaccacctggt
aaagaagaaggcccgacaaccaaagggtcccaactggtgtggggtggggatgccaaccgc
ccctctgcattccatcgaggcagcacaagaaaaagaagtttctaccccaaacccaaagcc
tgctgggtgtcccccatggccaaggtccctgctgagagtcccggagccccatcccctcat
cccagtagcccaggtcttggcagtaagcgcggcttgggagaagatggatttgctcatggt
ggcaagaaactgagggcagtgtctccctttctgaaggaggtggatgccaaggagtctggg
ggcaagcctgccgcccctggcttggctgtatcctgtctactgggcccaaccccagggccc
actcctcccgagacctacaggggcaccatgctgcggtgtcctctaaacttcaccagtagc
gcagaccctctgaagggccaggcctcactccccttcagccccctggtcatccccgctttc
ccagcccacctcctggctacaacaggcccctcacctatggctgccagcctgatgcatttc
cctcccacgccctatgacgctgtcctccgcaacagactgggtccagcttcgtctgcctgg
cacatgccgcctgtcacagcctacgcggcacctcacttcttccacctcaacaccaaactg
tag
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