KEGG   Mus pahari (shrew mouse): 110321891
Entry
110321891         CDS       T05929                                 
Symbol
Yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110321891 (Yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mpah01002]
    110321891 (Yod1)
Peptidases and inhibitors [BR:mpah01002]
 Cysteine peptidases
  Family C88
   110321891 (Yod1)
SSDB
Motif
Pfam: OTU OTU1_UBXL Ubiquitin_2 zf-C2H2_2
Other DBs
NCBI-GeneID: 110321891
NCBI-ProteinID: XP_021054134
Ensembl: MGP_PahariEiJ_G0027791
LinkDB
Position
5:105018868..105024735
AA seq 343 aa
MFGGAKGGHFGVPPAGYSGAVPQAEAGTKAGPAGGRPADTMWRLRCKAKGGTHVLQGLSS
RTRLRELQGQIAAITGIAPGSQRILVGYPPECLDLSDRDITLGDLPIQSGDMLIVEEDQT
RPKASPAFSKHGAPSYVRETLPVLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRL
IAQIVASDPDLYSEAILGKTNEDYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVR
IDRFGEDAGYTKRVLLIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALELADEAR
RKRQFTDVNRFTLRCMVCQKGLTGQAEARDHARETGHTNFGEV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgtttggaggcgcaaaaggcggccattttggggtcccccccgctggttactccggcgct
gtcccccaggctgaggccgggaccaaggctggccccgcaggaggccggccggctgacact
atgtggcggctccgctgcaaggccaagggtggcacccacgttttgcagggtctttccagc
cggacccgcttacgggaactgcagggccaaatcgccgctatcaccggcatcgctccgggc
agtcagcgaatcctcgtcggctacccgcccgagtgcctggatctcagcgaccgggacatc
actcttggggacctgcccattcagtcaggtgacatgctgattgtcgaagaagaccaaacc
agaccaaaagcttcccctgcgttttcaaaacatggtgctcctagttatgtcagggaaact
ctgcctgtgcttaccagaaccgcagtcccagcagacaactcttgcctctttaccagtgtg
tactatgtcgttgaaggaggagtcttgaatccagcttgtgcccctgagatgagacgcctc
atagcgcaaattgtagcaagtgatccggacttgtatagcgaggcgatactggggaagaca
aacgaagactactgtgactggatccgaagggatgatacatgggggggagcaatcgagatc
tcgatcctgtctaagttttaccaatgtgaaatatgtgtagtggatacacagacagtcaga
atcgatcgttttggggaagatgcagggtataccaaaagagttctgcttatctacgatggc
atccactacgatccgcttcagcgtaacttccctgatccagatacccctcctctgaccatt
ttctcctcaaatgatgatattgttctcgtacaagcactggaattagctgatgaagctaga
agaaagagacagttcactgacgtaaaccgcttcaccctgaggtgcatggtgtgtcagaag
ggcctaaccggacaagccgaagcaagggaccatgccagggagacagggcataccaacttt
ggagaggtgtga

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