Mus pahari (shrew mouse): 110322004
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Entry
110322004 CDS
T05929
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04110
Cell cycle
mpah04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110322004 (Smc3)
04114 Oocyte meiosis
110322004 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110322004 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mpah00535
]
110322004 (Smc3)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110322004 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
110322004 (Smc3)
Proteoglycans [BR:
mpah00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110322004 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
110322004
NCBI-ProteinID:
XP_021054223
Ensembl:
MGP_PahariEiJ_G0014562
LinkDB
All DBs
Position
1:164750868..164795856
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagaccaaacgattgta
gatcccttcagctcaaaacataatgtcatcgtgggcagaaatggatctggaaaaagcaac
ttcttttatgcaatccagttcgttctcagtgatgaattcagccatcttcgtccagagcag
cgattggctttgttgcatgagggtacaggtcctcgggttatttctgcttttgtggaaatc
atttttgacaattcggacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcaatatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctgggttttccagaagtaatccttattacattgttaaa
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattaaaactgttgaga
gaagtagctggtactagagtgtatgatgaacgtaaagaagaaagtatctccctgatgaaa
gaaacagagggcaaacgggaaaagatcaatgagttgttaaaatacattgaagagcgattg
cataccctagaggaggaaaaggaggaactggcacagtatcagaaatgggataagatgagg
cgtgccctggagtatacaatctacaaccaggagctcaacgagacgcgtgctaagctcgat
gagctttctgctaagcgagaaacgagtggagagaaatccagacagctaagggatgcccaa
caggatgcaagagacaaaatggaggatattgagcgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagaacagcttagtgctgaaagacaagagcagattaag
caaaggaccaagttggaacttaaagccaaggatttacaagatgagctggcgggcaacagt
gaacagcggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgctaggttggctcaagctacacaggaaagaactgatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagagataagtggattaaaaaggaactgaag
tctttagatcaggcgattaatgataagaaaagacagattgctgctatacataaggatttg
gaggataccgaggcaaataaagagaaaaatctggagcaatataataaactggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagaacaa
caagcacttgctgctaaaagagaagacctcgagaagaagcagcaacttcttagagcggct
acaggaaaggccattttaaatggaatagatagcattaacaaagtgctagaacattttcgg
cgaaaaggtataaaccaacatgttcaaaatggctaccatggcatcgtaatgaataacttt
gagtgtgaaccagctttctatacttgtgtggaagtcactgctggtaacaggttgttttat
cacattgttgactctgatgaagtcagcacaaaaattttaatggagttcaataaaatgaat
cttcctggtgaggtgactttcctgcctcttaacaagttagatgtgagagatactgcctat
cctgaaactaacgatgctattcctatgatcagtaagctgaggtacaatcccagatttgac
aaagctttcaaacatgtatttggaaagacgctcatctgtcggagcatggaggtttcaact
cagctggcccgagcctttactatggactgtattactttggaaggtgatcaagtcagccac
cgaggtgctctgactggaggctattatgacacaagaaagtctcgacttgagttacagaaa
gacgttagaaaagcagaagaggagctgggtgagctcgaggcaaagctcaatgaaaaccta
cgcaggaacattgaaaggattaataatgaaattgaccagttgatgaatcaaatgcagcag
atagagacccaacaaagaaaatttaaagcatccagagatagcatattgtcagagatgaag
atgctaaaagagaagagacagcaatcagaaaagaccttcatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgctatggagtctaccagagaatcactgaaagcagaa
ctaggaacggatttgctttctcagctcagtctggaagatcagaaaagagtcgatgcactg
aatgatgaaatccgtcaacttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gccacaacatcagaacttgaagctattaataaaagagtaaaagacactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagc
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgatactaaa
gaactggagaagatgaccaaccggcaaggcatgctgttgaagaagaaagaagagtgtatg
aagaaaattcgagagctgggatcccttccccaggaagcatttgagaagtaccagacactg
agtcttaagcagttgtttcgaaaactagagcaatgcaacacagagttaaagaagtacagc
cacgtgaacaagaaggctctagatcagtttgtgaatttctctgagcagaaagaaaagcta
ataaagcgacaagaggaattggataggggctacaaatcaatcatggaattgatgaatgta
ctcgaacttagaaaatatgaagctattcagttaactttcaaacaggtatctaagaacttc
agtgaagttttccagaagttggtacctggtggcaaagcaactttggtgatgaagaaagga
gatgtggagggcagccagtctcaggacgaaggagaagggagcggtgagagcgagcggggc
tctgggtcacagagcagtgttccatcagttgaccagttcacaggagttgggatcagggtg
tcatttacagggaagcaaggggagatgagagaaatgcagcagctttcaggaggacagaaa
tctctggtagcccttgctctcatctttgccattcagaaatgtgaccctgctcctttttac
ctgtttgatgagatcgaccaagctttggatgctcagcacagaaaagctgtgtcagatatg
attatggagctagctgtacacgcccagtttattactactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagacgataccacacatggttaa
DBGET
integrated database retrieval system
