Mus pahari (shrew mouse): 110322191
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Entry
110322191 CDS
T05929
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110322191 (Pms1)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110322191 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HMG_box_2
HMG_WDHD1
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
110322191
NCBI-ProteinID:
XP_021054417
Ensembl:
MGP_PahariEiJ_G0027369
LinkDB
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Position
5:complement(32687375..32797407)
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AA seq
852 aa
AA seq
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MKQLPAATVRLLSSSQTITSVVSVVKELVENSLDAGATSIDVRLVAVTTRTAADDFSTQY
VLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGV
LKPDIRIIFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVEQRCEESQIYLSGFFP
KHDADHKSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKIDV
PSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESYENNRVDVSSASMVVS
QTAETDVLFNKMESSGSNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYCDDHFSGDI
NKDTFQNIPMNNLSSEANQSKHSKTHSVGSIEHIQGENGRNGTGGRGGDGREALPETALE
ICADDWSKGNVCNSMGENIEPVKILVPQKSLACKVTNSHPSLEPANLSDGPCSRTSNVIH
SRSGQLTAYDLISNRAVKKPMSASALFIQDHRTQFLTENPKTVLEDATEQIKAQWETLSE
EEKHKYEEKAKKDLERYNNQMKKAIEQETQVSLKDGRKKIRGWTQKHKVKDSSNQPKLDE
LFQSQNEKKKSENIKMTEIPFSMENLKVNFKKQKEVDLEEKDEICLIHSLKFPDAWLVTS
RADVMLLNPYRVEEALLFKRLLENHKLRAEPLEKPIILTESLLNGSHYLEVLRKMSTVEE
RGSGSAYLCDPRLTANGFKIRLTPGVSSTENYLEIEGMAQCLPFYGIMDLKEILNAIVNK
NAKEIYECRPRKVINYLEGEAVRLSRQLPMYLPREDVQDLIYRMKHQFGKEIKGCVHGRP
FFHHLTHLPGTS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagttcgcctcctgtccagttctcagacaatcacatca
gtggtcagtgttgtgaaagagcttgttgaaaactccttggatgccggagctaccagcatt
gatgttagactggtggcagttacaacaaggacagctgccgatgacttcagcactcagtat
gttttagacggcagtggccacatactttctcagaagccttcacatcttggtcaaggtaca
actgtaactgctctaaagttgtttaagaatctacctgtaagaaaacaattttactcaaca
gctaaaaagtgtaaagatgaactaaaaaatgtacaggatcttctcataagctacggtgtc
ctgaaacctgacataaggattatttttgtacataataaggcagttatttggcagaaaagt
agagttccagatcacaggatggctctaatgtctgttctgggaactgctgtgatgggcaac
atggaatctgttgagcagcgctgtgaagaatctcagatttacctaagtggattcttccca
aagcatgatgcagaccacaagtccacaagtctttcaaccccagagagaagtttcatcttt
attaatagtcgaccagtacatcaaaaagatatactaaagttaattcgacgctattataat
ctgaagtgcctaaaggagtctacccgcttgtatcccattttctttctgaaaattgatgtt
ccatcagctgaggtggatataaatctaacaccagataaaagtcaagtgttattacaaaat
aaggaatctgttttaattgctcttgaaaatctgatgatgacctgttatggaccactaccc
actacagagtcttatgaaaataacagagtagatgtttcctcagccagcatggttgttagt
caaacagcagaaacagacgtgctttttaataaaatggaatcatctggaagtaattatcca
aatgctgatacttctgctattcacttccaaaaggatgaatctagaaaaaacattgatcat
catttaaatgaacagataaatataggcaattattgtgatgatcattttagtggtgacatt
aataaggacacatttcaaaatatccctatgaataatttatcatcagaggctaatcagagt
aaacacagtaaaactcattctgtaggttctattgagcatatccaaggagaaaatggcagg
aatggtacaggaggacgtggtggagatgggagggaagcacttcctgagacagctctggaa
atctgtgcagatgattggagcaaaggaaatgtatgtaattcgatgggagagaatatcgaa
cctgtgaaaattttagtgccacaaaagagcttagcatgtaaagtgaccaatagtcaccca
agccttgaaccagcgaatctcagtgatggtccatgtagcagaacatcaaatgtaatccat
agcagatctggacagcttacagcctatgacttaattagcaatcgagcagtcaagaagccc
atgtcggccagtgccctgttcattcaagaccaccgtactcagttcctcacagagaatccc
aagactgttttagaggatgcgacagaacaaattaaagcacaatgggagacactgagtgaa
gaggaaaaacacaaatatgaggaaaaggctaaaaaggacttggaacgatacaataaccaa
atgaagaaagctattgagcaggagacacaagtatcattaaaagacggcaggaaaaagata
aggggctggacacagaaacataaggtgaaagattcatctaatcagccaaaacttgacgag
ctctttcagtcccagaatgaaaagaagaagagtgaaaatattaaaatgacagagatcccc
ttttctatggaaaacttaaaagtgaactttaagaaacaaaaggaagttgatttagaggag
aaggatgagatatgcctgatccacagtctcaagtttcctgatgcatggctggtcacatcc
agagcagatgtcatgttactgaacccgtacagagtggaggaagccctgctatttaaaaga
cttcttgagaatcataaactccgtgcagaaccactggaaaagccaattatattaacagag
agtcttcttaatgggtctcattatctggaggttttacgtaaaatgtcaacagttgaggaa
agaggcagtggatcagcttacctgtgtgaccctcgtcttacagcaaatggcttcaagatc
agattgacaccaggagtttccagtactgagaactacttggaaatagaaggaatggctcag
tgtctcccattctatggaataatggatttaaaggaaattcttaatgctatagtaaacaaa
aatgcaaaggagatttatgaatgtagacctcgaaaagtgataaattatctggagggagaa
gccgtccgtctatccagacagctacccatgtacttaccacgagaggatgtccaagatctt
atctatagaatgaagcaccagtttggaaaagaaattaaaggctgtgttcatggccgccca
ttttttcatcatttgacccatcttccaggaacttcatga
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