KEGG   Mus pahari (shrew mouse): 110322191
Entry
110322191         CDS       T05929                                 
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1
  KO
K10864  DNA mismatch repair protein PMS1
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110322191 (Pms1)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     110322191 (Pms1)
SSDB
Motif
Pfam: DNA_mis_repair HMG_box HMG_box_2 HMG_WDHD1 HATPase_c_3
Other DBs
NCBI-GeneID: 110322191
NCBI-ProteinID: XP_021054417
Ensembl: MGP_PahariEiJ_G0027369
LinkDB
Position
5:complement(32687375..32797407)
AA seq 852 aa
MKQLPAATVRLLSSSQTITSVVSVVKELVENSLDAGATSIDVRLVAVTTRTAADDFSTQY
VLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGV
LKPDIRIIFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVEQRCEESQIYLSGFFP
KHDADHKSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKIDV
PSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESYENNRVDVSSASMVVS
QTAETDVLFNKMESSGSNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYCDDHFSGDI
NKDTFQNIPMNNLSSEANQSKHSKTHSVGSIEHIQGENGRNGTGGRGGDGREALPETALE
ICADDWSKGNVCNSMGENIEPVKILVPQKSLACKVTNSHPSLEPANLSDGPCSRTSNVIH
SRSGQLTAYDLISNRAVKKPMSASALFIQDHRTQFLTENPKTVLEDATEQIKAQWETLSE
EEKHKYEEKAKKDLERYNNQMKKAIEQETQVSLKDGRKKIRGWTQKHKVKDSSNQPKLDE
LFQSQNEKKKSENIKMTEIPFSMENLKVNFKKQKEVDLEEKDEICLIHSLKFPDAWLVTS
RADVMLLNPYRVEEALLFKRLLENHKLRAEPLEKPIILTESLLNGSHYLEVLRKMSTVEE
RGSGSAYLCDPRLTANGFKIRLTPGVSSTENYLEIEGMAQCLPFYGIMDLKEILNAIVNK
NAKEIYECRPRKVINYLEGEAVRLSRQLPMYLPREDVQDLIYRMKHQFGKEIKGCVHGRP
FFHHLTHLPGTS
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgaaacagttgcctgcagcaacagttcgcctcctgtccagttctcagacaatcacatca
gtggtcagtgttgtgaaagagcttgttgaaaactccttggatgccggagctaccagcatt
gatgttagactggtggcagttacaacaaggacagctgccgatgacttcagcactcagtat
gttttagacggcagtggccacatactttctcagaagccttcacatcttggtcaaggtaca
actgtaactgctctaaagttgtttaagaatctacctgtaagaaaacaattttactcaaca
gctaaaaagtgtaaagatgaactaaaaaatgtacaggatcttctcataagctacggtgtc
ctgaaacctgacataaggattatttttgtacataataaggcagttatttggcagaaaagt
agagttccagatcacaggatggctctaatgtctgttctgggaactgctgtgatgggcaac
atggaatctgttgagcagcgctgtgaagaatctcagatttacctaagtggattcttccca
aagcatgatgcagaccacaagtccacaagtctttcaaccccagagagaagtttcatcttt
attaatagtcgaccagtacatcaaaaagatatactaaagttaattcgacgctattataat
ctgaagtgcctaaaggagtctacccgcttgtatcccattttctttctgaaaattgatgtt
ccatcagctgaggtggatataaatctaacaccagataaaagtcaagtgttattacaaaat
aaggaatctgttttaattgctcttgaaaatctgatgatgacctgttatggaccactaccc
actacagagtcttatgaaaataacagagtagatgtttcctcagccagcatggttgttagt
caaacagcagaaacagacgtgctttttaataaaatggaatcatctggaagtaattatcca
aatgctgatacttctgctattcacttccaaaaggatgaatctagaaaaaacattgatcat
catttaaatgaacagataaatataggcaattattgtgatgatcattttagtggtgacatt
aataaggacacatttcaaaatatccctatgaataatttatcatcagaggctaatcagagt
aaacacagtaaaactcattctgtaggttctattgagcatatccaaggagaaaatggcagg
aatggtacaggaggacgtggtggagatgggagggaagcacttcctgagacagctctggaa
atctgtgcagatgattggagcaaaggaaatgtatgtaattcgatgggagagaatatcgaa
cctgtgaaaattttagtgccacaaaagagcttagcatgtaaagtgaccaatagtcaccca
agccttgaaccagcgaatctcagtgatggtccatgtagcagaacatcaaatgtaatccat
agcagatctggacagcttacagcctatgacttaattagcaatcgagcagtcaagaagccc
atgtcggccagtgccctgttcattcaagaccaccgtactcagttcctcacagagaatccc
aagactgttttagaggatgcgacagaacaaattaaagcacaatgggagacactgagtgaa
gaggaaaaacacaaatatgaggaaaaggctaaaaaggacttggaacgatacaataaccaa
atgaagaaagctattgagcaggagacacaagtatcattaaaagacggcaggaaaaagata
aggggctggacacagaaacataaggtgaaagattcatctaatcagccaaaacttgacgag
ctctttcagtcccagaatgaaaagaagaagagtgaaaatattaaaatgacagagatcccc
ttttctatggaaaacttaaaagtgaactttaagaaacaaaaggaagttgatttagaggag
aaggatgagatatgcctgatccacagtctcaagtttcctgatgcatggctggtcacatcc
agagcagatgtcatgttactgaacccgtacagagtggaggaagccctgctatttaaaaga
cttcttgagaatcataaactccgtgcagaaccactggaaaagccaattatattaacagag
agtcttcttaatgggtctcattatctggaggttttacgtaaaatgtcaacagttgaggaa
agaggcagtggatcagcttacctgtgtgaccctcgtcttacagcaaatggcttcaagatc
agattgacaccaggagtttccagtactgagaactacttggaaatagaaggaatggctcag
tgtctcccattctatggaataatggatttaaaggaaattcttaatgctatagtaaacaaa
aatgcaaaggagatttatgaatgtagacctcgaaaagtgataaattatctggagggagaa
gccgtccgtctatccagacagctacccatgtacttaccacgagaggatgtccaagatctt
atctatagaatgaagcaccagtttggaaaagaaattaaaggctgtgttcatggccgccca
ttttttcatcatttgacccatcttccaggaacttcatga

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