KEGG   Mus pahari (shrew mouse): 110322222
Entry
110322222         CDS       T05929                                 
Name
(RefSeq) aly/REF export factor 2
  KO
K12881  THO complex subunit 4
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03013  Nucleocytoplasmic transport
mpah03015  mRNA surveillance pathway
mpah03040  Spliceosome
mpah05014  Amyotrophic lateral sclerosis
mpah05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110322222
  09122 Translation
   03013 Nucleocytoplasmic transport
    110322222
   03015 mRNA surveillance pathway
    110322222
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110322222
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110322222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110322222
   03041 Spliceosome [BR:mpah03041]
    110322222
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110322222
    TREX complex
     110322222
Spliceosome [BR:mpah03041]
 Complex C
  Other components
   EJC/TREX
    110322222
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110322222
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT
Other DBs
NCBI-GeneID: 110322222
NCBI-ProteinID: XP_021054469
LinkDB
Position
5:144009671..144010935
AA seq 218 aa
MADKMDMSLDDIIKLNRSQRRVNRGGGPRRSRPAIARGGRNRPAPYSRPKPLPDKWQHDL
FDSGFGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADV
HFERRADALKALKQYKGVPLDGRPMDIQLVASQIDPQRRPAPSGNRGGRTRSRGSGGFGG
GGSQGRGRGNGRNSKQQQLSAEELDAQLDAYNARRDTN
NT seq 657 nt   +upstreamnt  +downstreamnt
atggccgacaagatggacatgtctttggacgacatcattaagctgaaccggagccagcgc
cgggtgaaccgaggcggcgggcctaggaggagccggcccgccatcgcccgcggcggccgg
aaccggccggcaccgtacagcagaccgaaaccacttccggacaagtggcagcacgaccta
ttcgacagcggcttcgggggcggggaaggcgtggagaccggtgccaagctgctcgtctca
aacctggacttcggggtgtcagatgctgacattcaggaactcttcgctgaatttggaacg
ttgaaaaaagccgctgtggactacgatcgctctgggcgaagtttagggacggcggatgtg
cactttgaacggagggcagatgccctgaaggctctgaagcagtacaagggcgtccctttg
gatggccgacctatggacatccagcttgtcgcgtcacagatcgatccacagcgaagaccc
gcaccaagcggaaacagaggcggcaggacaaggagccgtggctctggaggttttggtggc
ggcggcagccagggaagaggtagaggcaacggcaggaactcaaagcagcagcagctttct
gcagaggagttggacgcacaattggatgcttacaatgcaaggagggacaccaactaa

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