KEGG   Mus pahari (shrew mouse): 110322641
Entry
110322641         CDS       T05929                                 
Symbol
Rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04115  p53 signaling pathway
mpah04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110322641 (Rfwd2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    110322641 (Rfwd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110322641 (Rfwd2)
Enzymes [BR:mpah01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110322641 (Rfwd2)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110322641 (Rfwd2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110322641 (Rfwd2)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 zf-RING_2 Beta-prop_CAF1B_HIR1 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 DACNK zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 110322641
NCBI-ProteinID: XP_021055006
Ensembl: MGP_PahariEiJ_G0027985
LinkDB
Position
5:132118497..132238389
AA seq 669 aa
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAATLVSGGVAPAAGSG
GLGGPGRPVLVAAAVSGSASAGGAVSAGQSRLSCAARPSAGVGGSSSSLGSSSRKRPLLV
PLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLAN
VNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKRETKKQPWYNSTLASRRKRLTA
HFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSS
IVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYH
KNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWS
TNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAV
SYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENN
SLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQ
GTIKVLELV
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtctggtagccgccaggccggctcgggttccgctggaacgagccccggctcctcggcc
gcctcctcggtgacttccgcctcctcgtccttatcctcgtctccgtcgccgccgtccgtg
gcggcctcggcggcggcgacgctggtgtccggcggtgtggctccggccgcgggctccggc
ggcctcggcggcccgggacggcctgtgctggtggcggccgcggtgtctggcagcgcgagc
gccggcggggcggtgtccgcgggccagtcccggctcagttgcgcggccaggcccagcgcc
ggcgttggagggagcagctccagcctcggcagtagcagtaggaagcgacctctgctcgtc
ccgctttgtaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgtccc
atctgctttgatatgattgaagaagcatacatgacaaaatgtggccacagcttttgctac
aagtgtattcatcagagtttggaggacaataatagatgtcccaagtgtaattatgttgtg
gacaatattgaccatctctatcctaatttcttggtgaatgaactcattctcaaacagaag
caaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatgggcat
aggtggcaaatatttcaagatctgctaggaactgatcaagataaccttgatttggccaat
gtcaacctcatgttggaattattagtgcagaagaagaaacaactggaagcagaatcacat
gcagctcagctacagatccttatggaattcctcaaggttgcaaggagaaataagagagag
acaaagaaacagccttggtataacagcacattagcatcaagacgaaagcgactcactgct
cattttgaagacttagagcagtgttatttttctacaaggatgtctcgtatctcagatgac
agtagaactgcaagccagttagatgaatttcaagaatgcttgtccaagtttactcgatac
aactcagtaagaccgttggccacattgtcttatgctagtgatctctataatggttccagt
atagtttctagtattgaatttgaccgggattgtgactattttgcaattgctggagttaca
aagaagattaaagtttatgaatatggcacagtcatccaggatgcagtagatattcattac
cctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagttaccat
aagaacctgctagccagcagtgattatgaaggcactgttatactatgggatggattcaca
ggacagaggtcaaaggtctatcaggagcatgaaaagaggtgttggagtgttgactttaat
ctgatggatcctaaacttctggcttcaggttctgatgacgcaaaagtgaagctgtggtcc
accaatttagacaattctgtggcgagcattgaggcaaaggctaacgtgtgctgtgtgaag
ttcagcccctcctccaggtaccatctggctttcggctgtgcagatcactgtgtccactac
tacgatcttcgtaacactaaacagccaataatggtattcaagggacaccgaaaagcagtg
tcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaacagacagccaacta
aaactgtggaatgtgggaaaaccatactgtctacgttccttcaagggtcatattaatgaa
aaaaacttcgtaggccttgcttccaatggagattatatagcttgtggaagtgagaacaac
tccctctacctgtattataaaggactttctaaaactttgctaacttttaagtttgataca
gttaagagtgtattagacaaagatcggaaagaagatgacacgaatgaatttgtcagtgct
gtgtgttggcgagcactatcagacggggagtccaatgtgctgattgctgctaacagccag
ggtacaattaaggtgctagaattggtataa

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