Mus pahari (shrew mouse): 110322670
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Entry
110322670 CDS
T05929
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110322670 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110322670 (Trip12)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110322670 (Trip12)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
HECT type E3
110322670 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
110322670
NCBI-ProteinID:
XP_021055043
Ensembl:
MGP_PahariEiJ_G0027576
LinkDB
All DBs
Position
5:complement(62707593..62826617)
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AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKRKGYIPPESRKSNFKAPKVQ
SNTTTELSRGHLSKRSCSSSSAVIVPQPEDPDRASTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPRAFQHIESLSETNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCVKSGSGSETTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAIASASSTVPAGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTPASSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARAAGVSGLARAASKDTISNNREKIKGWIKDQAHKFVEHYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
AGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESTKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacacttagggcaggcaaaa
cgtaagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactactactgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacagccagaggatccagacagagccagtacttcagaaaggcag
aaaacggggcaggtgcctaaaaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcaaaaaagcccagagcatttcagcatatt
gagtctctctcagaaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccatcaacaagcaaggctcacaccagaaagagt
gtggctgctggcagttcacggagtcagaaaagaaagaggacagagagttcttgtgttaag
agtggttctgggtccgaaacaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
gctgcctctacttcctcctcatcttcagctatagcctcggcctcttctactgtaccagca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcatcc
agccctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgcttcagccccaaagttagcctacctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaagtctaccaagaagcgcagtgagtccccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggcccggcggcaagagaaaatggcagac
cctgaaagcaaccaggagacagtaaattcctcagctgcccggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctatttggtcctctcggtcctcggatgtcacaacttttccatagaacaattgga
agcggagcaagttctaaggctcagcagcttcttcaaggactacaagccagtgatgaaagt
caacagcttcaggcagtcattgaaatgtgtcagttattggtcatggggaatgaggagaca
ctaggagggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaa
cataattttgacattatgaatcatgcttgccgagccttaacatatatgatggaagccctc
cctcggtcatctgctgttgtagtagatgccatccctgttttcttagaaaagctgcaagtt
attcagtgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacggaga
cacagtaaagccatcttacaggcgggtggtttggcagattgcttgttgtatctagaattc
ttcagcatcaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatc
acaccagatgagtttcattttgtggcagattccctaccattgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtttagtggacaac
tttcaacatgaggagaacttactgcaacaggttgcttccaaagatctacttacaaatgtt
caacaattgttggtagtgactccaccaatattaagttctgggatgtttattatggtggtt
cgcatgttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaaacaa
aacattgcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagaa
caaattgatcttgttccgcgaagtcctcaagaactatatgaactgacatctttgatttgt
gaacttatgccatgtttaccaaaagaaggcatctttgcagttgataccatgttgaaaaag
ggaaatgcacagaacacagatggtgcaatatggcagtggcgggatgaccgaggcctctgg
catccctataacaggattgatagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaagacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagctaatg
aaagaagatccggaactggctaagtctttcattaagaccttgtttggtgttctctatgaa
gtgtacagctcctcagcaggccctgcggtcagacacaagtgccttagagcaattcttagg
ataatttattttgctgatgctgaacttctgaaggatgttctgaaaaatcatgctgtttca
agtcacattgcttccatgctatccagccaagacctgaagatagtagttggagctcttcag
atggctgaaatcctaatgcaaaagttacctgatatttttagtgtttacttcaggagagaa
ggtgtgatgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtcccccc
aaggcatgtacaaatgggtcaggatccctgggatctactacaccagccagcagtggtact
gcaacagcagcaaccaacgcctctgctgatctggggtcacctagcttgcagcatagcaga
gatgattctctggatctgagtcctcaaggtcgattaagtgatgttctcaagagaaaacga
ctgccaaaacgagggccaagaaggccaaaatattcccctccaagagatgatgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcttccttcctggcaagc
ttgaatccaaaaacatggggaaggttaagcgcacagtccaacagcaacaacatcgaacca
gcacgagctgcaggagttagtggtcttgccagagcagcctcaaaagacaccatatccaat
aatagagaaaaaattaaaggctggattaaggaccaggcacataaatttgttgagcattat
tttagttctgagaatatggatggaagcaaccctgccttgaatgtccttcagagactttgt
gctgctactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtttcttcatttgaaatccaacatagtgggtttgtg
aaacaactgttgctgtatttaacatctaagagtgaaaaggatgctgtcagcagagagatc
cggttaaagcgtttccttcatgtatttttttcttctccacttcctggagaagagcctgtt
ggaagagtagaaccagtgggccatgcgcctttgctggcattggttcacaagatgaacaac
tgtctcagccaaatggagcaatttccagtcaaagtacatgatttccctagtgggaatgga
gctggaggaagcttttctctcaacagaggatcacaagctttaaaatttttcaacacacat
cagttaaaatgtcagttacaaagacacccagactgtgcaaatgtgaagcagtggaaaggc
gggcctgtcaagattgatcccctggctctggtgcaagctattgagagataccttgtggtt
agaggatatggaagagtaagagaagatgatgaggacagtgatgatgatgggtcagatgaa
gaaatagatgagtctctggctgctcaattcttaaattcgggaaatgtaaggcacagacta
cagttttatattggagaacatttactaccatataacatgaccgtgtatcaggcagtgcgg
cagttcagtgtacaggctgaagatgaaagagaatctactgatgatgagagcaatcctctg
ggaagagctggaatttggacaaagactcatacaatatggtacaaacctgtgagggaggat
gaagaaagtactaaagattgtgttggtggcaaaagggggagagcccaaacagctccaaca
aaaacttcccccagaaatgcaaagaagcatgatgagttatggcacgatggagtgtgcccg
tcagtagcaaatcctttagaagtttacctcattcccacaccacctgaaaatatcaccttt
gaagacccatccttagatgtaatacttcttttaagagttttacatgccatcagtcgatat
tggtattacttgtatgataatgcgatgtgcaaggagattattccaactagtgaatttatt
aacagtaaattaacagcaaaagcgaataggcagcttcaagatcctctagtaatcatgaca
ggaaacatcccaacatggctcactgagctaggaaaaacctgcccatttttctttcctttt
gatacccgacaaatgcttttttatgtaaccgcatttgatcgggaccgggcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagacagcagggttgcacct
agattggatagaaaaaaacgtactgtgaacagagaggagctactgaaacaagccgagtct
gtgatgcaggaccttggcagctctcgggccatgttagaaatccaatatgaaaatgaggtt
ggtacaggtctggggccaacactggagttttatgcacttgtttctcaggaactacagaga
gccgacttaggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggaca
gctaagccagctcacatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatg
gctaaggctatcatggatttcagattggtggaccttcctcttggcctgcccttttataag
tggatgctgcggcaggaaacttcattgacatctcatgatttatttgacattgatcctgtt
gtagccagatcagtatatcacctagaagacattgtcagacagaagaaaagactggaacag
gataaatcccagaccaaagagagtctacaatacgcattggaaactcttacgatgaatggc
tgttcagtggaagatctgggattggattttacactgcctgggtttcccaacattgaattg
aagaaaggaggaaaggatattccagttactatccacaatttggaagagtacctaagattg
gtgatattctgggcactaaatgaaggtgtttgtcggcagtttgactcattcagagatgga
tttgaatcggtcttcccgctcagccatcttcagtacttctacccagaagagctggaccag
ctcctgtgtggcagtaaagcagacacttgggatgcaaagacattgatggaatgctgcaga
cctgatcatggctatactcatgacagtcgtgctgtgaagttcttgtttgagattctcagt
agttttgataatgagcagcagaggttgtttctccagtttgtgactggtagcccacgattg
ccagttggaggatttcggagtttaaatccacctctgacaattgtgcggaagacatttgaa
tcaacagaaaacccagatgacttcttaccatcagtaatgacttgtgtgaactatcttaag
ttgccggactactcgagcattgagataatgcgggacaaactcttgatagcagcaagagaa
ggccaacagtcgttccatctttcctga
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integrated database retrieval system
